RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 PELI2Q9HAT8 420 aa9.4□□□□□ -0.9
CHD8-204ENST00000553622 TNFRSF12AQ9NP84 129 aa9.4□□□□□ -0.9
CHD8-204ENST00000553622 SLC6A20Q9NP91 592 aa9.4□□□□□ -0.9
CHD8-204ENST00000553622 TRPS1Q9UHF7 1281 aa9.4□□□□□ -0.9
CHD8-204ENST00000553622 POMT2Q9UKY4 750 aa9.4□□□□□ -0.9
CHD8-204ENST00000553622 ATXN7L1Q9ULK2 861 aaPredicted RBP9.4□□□□□ -0.9
CHD8-204ENST00000553622 BTRCQ9Y297 605 aa9.4□□□□□ -0.9
CHD8-204ENST00000553622 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.4□□□□□ -0.9
CHD8-204ENST00000553622 ADAMTS20P59510 1910 aa9.4□□□□□ -0.9
CHD8-204ENST00000553622 RIF1Q5UIP0 2472 aaKnown RBP9.4□□□□□ -0.91
CHD8-204ENST00000553622 FRYLO94915 3013 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 WDR87Q6ZQQ6 2873 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 FEZF1A0PJY2 475 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 EME2A4GXA9 379 aaPredicted RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 A8MU76 341 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 AGRPO00253 132 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 HGSO14964 777 aaPredicted RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 CASC3O15234 703 aaKnown RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 OR1F1O43749 312 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 PRICKLE3O43900 615 aaPredicted RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 NRP2O60462 931 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 FOXD2O60548 495 aaPredicted RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 UGDHO60701 494 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 PRAMEF4O60810 478 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 KRT6AP02538 564 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 STATHP02808 62 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 KRT6BP04259 564 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 SERPIND1P05546 499 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 UROSP10746 265 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 PNLIPP16233 465 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 MAGP20916 626 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 CXCR2P25025 360 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 CSF2RBP32927 897 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 GRK3P35626 688 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 HNF4AP41235 474 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 GRIA3P42263 894 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 KRT6CP48668 564 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 ARL4DP49703 201 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 CYP4F2P78329 520 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 GALNT1Q10472 559 aaPredicted RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 IFT88Q13099 833 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 LAPTM5Q13571 262 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 ZRSR2Q15696 482 aaKnown RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 SLC5A12Q1EHB4 618 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 PRAMEF9Q5VWM5 478 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 LIPJQ5W064 366 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 KANK2Q63ZY3 851 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 GRHL2Q6ISB3 625 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 MED27Q6P2C8 311 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 FIGLAQ6QHK4 219 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 PLXDC1Q8IUK5 500 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 PLD3Q8IV08 490 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 WDR75Q8IWA0 830 aaKnown RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 KIRREL3Q8IZU9 778 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 CLYBLQ8N0X4 340 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 TBC1D19Q8N5T2 526 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 PIWIL2Q8TC59 973 aaKnown RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 TWIST2Q8WVJ9 160 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 FAR2Q96K12 515 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 MAGEB10Q96LZ2 347 aaPredicted RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 HBEGFQ99075 208 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 MAP3K3Q99759 626 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 ELAC2Q9BQ52 826 aaKnown RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 NUDT22Q9BRQ3 303 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 EFCAB11Q9BUY7 163 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 TRIM55Q9BYV6 548 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 SLC29A3Q9BZD2 475 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 EPN3Q9H201 632 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 SEMA6CQ9H3T2 930 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 LRRN3Q9H3W5 708 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 TMEM184CQ9NVA4 438 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 GEMIN8Q9NWZ8 242 aaKnown RBP9.39□□□□□ -0.91
CHD8-204ENST00000553622 SOHLH2Q9NX45 425 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 DCTN4Q9UJW0 460 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 ZNF225Q9UK10 706 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 SNX7Q9UNH6 387 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 SNX6Q9UNH7 406 aa9.39□□□□□ -0.91
CHD8-204ENST00000553622 IGKV1-8A0A0C4DH67 115 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 A0A0G2JND7 137 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 SLC9B1P1A6NJY1 282 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 PROB1E7EW31 1015 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 MANBAO00462 879 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 HAT1O14929 419 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 MAP3K7O43318 606 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 KIF1CO43896 1103 aaKnown RBP9.38□□□□□ -0.91
CHD8-204ENST00000553622 PRAMEF10O60809 474 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 DIAPH2O60879 1101 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 SHOX2O60902 331 aaPredicted RBP9.38□□□□□ -0.91
CHD8-204ENST00000553622 SH3BGRLO75368 114 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 WFS1O76024 890 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 LINC00032P0C843 101 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 JUPP14923 745 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 ST6GAL1P15907 406 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 CD22P20273 847 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 DRD4P21917 467 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 TGM1P22735 817 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 HRH2P25021 359 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 CD1CP29017 333 aa9.38□□□□□ -0.91
CHD8-204ENST00000553622 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
CHD8-204ENST00000553622 LSSP48449 732 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms