RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TRA2BP62995 288 aaKnown RBP5.4□□□□□ -1.54
SCFD1-208ENST00000553278 EEF1A1P68104 462 aaKnown RBP5.4□□□□□ -1.54
SCFD1-208ENST00000553278 MBTD1Q05BQ5 628 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 DMPKQ09013 629 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 ELP6Q0PNE2 266 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 LRRC74AQ0VAA2 488 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 CALCRLQ16602 461 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 ODF4Q2M2E3 257 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 XKR9Q5GH70 373 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 EEF1A1P5Q5VTE0 462 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 PRAMEF7Q5VXH5 474 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 OR4A47Q6IF82 309 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 OR7E24Q6IFN5 339 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 SHC4Q6S5L8 630 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 RAD9BQ6WBX8 426 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 LDLRAD3Q86YD5 345 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 CRYBG2Q8N1P7 616 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 THRSPQ92748 146 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 TANKQ92844 425 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 TSACCQ96A04 125 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-208ENST00000553278 ULK4Q96C45 1275 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 FAM20AQ96MK3 541 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 SSX3Q99909 188 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 ASCL2Q99929 193 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 TRAF4Q9BUZ4 470 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-208ENST00000553278 TRMT61BQ9BVS5 477 aaKnown RBP5.4□□□□□ -1.54
SCFD1-208ENST00000553278 CARD6Q9BX69 1037 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 CCSER1Q9C0I3 900 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 ZMYND12Q9H0C1 365 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 ECT2Q9H8V3 914 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 TRPC7Q9HCX4 862 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 OLFML3Q9NRN5 406 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 FAM212BQ9NTI7 297 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-208ENST00000553278 ZNHIT2Q9UHR6 403 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 DAPK2Q9UIK4 370 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 SIX4Q9UIU6 781 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 SH3GLB1Q9Y371 365 aa5.4□□□□□ -1.54
SCFD1-208ENST00000553278 PDS5AQ29RF7 1337 aaKnown RBP5.4□□□□□ -1.55
SCFD1-208ENST00000553278 TRAV18A0A075B6X5 111 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 SLC15A5A6NIM6 579 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 GPR89AB7ZAQ6 455 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 E9PI62 339 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF197O14709 1029 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 CLDN3O15551 220 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 PSMD3O43242 534 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 OR6A2O95222 327 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 BAG3O95817 575 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 GPR89BP0CG08 455 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 DLATP10515 647 aaKnown RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 KRT13P13646 458 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 RPS2P15880 293 aaKnown RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF23P17027 643 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 MARCKSP29966 332 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 PKLRP30613 574 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 USP8P40818 1118 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 KCNJ4P48050 445 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 SLC3A1Q07837 685 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 SPP2Q13103 211 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 MFAP5Q13361 173 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 GTF2H2Q13888 395 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 TRIM29Q14134 588 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 RBMS2Q15434 407 aaKnown RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 CARTPTQ16568 116 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 DUOXA1Q1HG43 343 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 KIF19Q2TAC6 998 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 TDRD12Q587J7 1177 aaKnown RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 HERC4Q5GLZ8 1057 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF770Q6IQ21 691 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 GTF2H2CQ6P1K8 395 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 CRIP3Q6Q6R5 217 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 CD164L2Q6UWJ8 174 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ARSKQ6UWY0 536 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 SAMD14Q8IZD0 417 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 DCP1BQ8IZD4 617 aaKnown RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 FAM216AQ8WUB2 273 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 PIGBQ92521 554 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ESAMQ96AP7 390 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 DTNBP1Q96EV8 351 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ABHD8Q96I13 439 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 NACAP1Q9BZK3 213 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 DCLK3Q9C098 648 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 SDCBP2Q9H190 292 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 RIMS4Q9H426 269 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 C10orf88Q9H8K7 445 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 PHPT1Q9NRX4 125 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 CENPMQ9NSP4 180 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF701Q9NV72 531 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 TMEM30AQ9NV96 361 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 TRNAU1APQ9NX07 287 aaKnown RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ZNF624Q9P2J8 865 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 OR2W1Q9Y3N9 320 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 PTGDR2Q9Y5Y4 395 aa5.39□□□□□ -1.55
SCFD1-208ENST00000553278 ARHGEF17Q96PE2 2063 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-208ENST00000553278 A0A0G2JNG1 304 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 LINC01553A4QN01 128 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 ANKDD1BA6NHY2 528 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 C17orf105B2RV13 164 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 INAFM1C9JVW0 142 aa5.38□□□□□ -1.55
SCFD1-208ENST00000553278 H0YCG3 227 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms