RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 NRP2O60462 931 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 VPS26AO75436 327 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 WISP2O76076 250 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 F10P00742 488 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 CELA2AP08217 269 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 CYC1P08574 325 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 ERVK-10P10266 1014 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 PKMP14618 531 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 RPS3P23396 243 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 CYLC1P35663 651 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 FDFT1P37268 417 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 GRIA1P42261 906 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 PRDX1Q06830 199 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 FAM53BQ14153 422 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 FASTKQ14296 549 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 ARHGAP19Q14CB8 494 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 LONRF1Q17RB8 773 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 KRTAP21-3Q3LHN1 58 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 LRRC8BQ6P9F7 803 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 SPNS3Q6ZMD2 512 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 OTOAQ7RTW8 1153 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 LDB1Q86U70 411 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 PAQR7Q86WK9 346 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 MPP5Q8N3R9 675 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 MTFMTQ96DP5 389 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 MMABQ96EY8 250 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 C14orf79Q96F83 325 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 FOPNLQ96NB1 174 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 OR2A5Q96R48 311 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 SPOCK3Q9BQ16 436 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 YIPF2Q9BWQ6 316 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 CATSPERZQ9NTU4 200 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 UTP6Q9NYH9 597 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 MARCH4Q9P2E8 410 aaPredicted RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 GNPTGQ9UJJ9 305 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 RUVBL1Q9Y265 456 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 R3HDM2Q9Y2K5 976 aaKnown RBP9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 TCAF1Q9Y4C2 921 aa9.34□□□□□ -0.91
TRAFD1-207ENST00000550051 IGKV1-8A0A0C4DH67 115 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 GRID2IPA4D2P6 1211 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 CDK2AP1O14519 115 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 KRT38O76015 456 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 CLDN14O95500 239 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 MLYCDO95822 493 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 SNRPB2P08579 225 aaKnown RBP9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 ESRRAP11474 423 aaPredicted RBP9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 ATP5DP30049 168 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 HSD17B2P37059 387 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 KIR3DL1P43629 444 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 EFNA3P52797 238 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 NAP1L1P55209 391 aaKnown RBP9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 EEF1A2Q05639 463 aaKnown RBP9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 GBX1Q14549 363 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 ANKRD20A4Q4UJ75 823 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 ZNF766Q5HY98 468 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 PCID2Q5JVF3 399 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 PLAG1Q6DJT9 500 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 FAAH2Q6GMR7 532 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 ZNF425Q6IV72 752 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 PPP1R21Q6ZMI0 780 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 SPPL2CQ8IUH8 684 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 TAB3Q8N5C8 712 aaPredicted RBP9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 CSNK1A1LQ8N752 337 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 ACBD4Q8NC06 268 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 OR9A1PQ8NGU1 263 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 SMPDL3AQ92484 453 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 WNT2BQ93097 391 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 ZNF354BQ96LW1 612 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 BIRC8Q96P09 236 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 CYTH2Q99418 400 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 ENKD1Q9H0I2 346 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 SYNPO2LQ9H987 977 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 CHRAC1Q9NRG0 131 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 AMFRQ9UKV5 643 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 MKL2Q9ULH7 1088 aa9.33□□□□□ -0.92
TRAFD1-207ENST00000550051 A0A0A6YYC8 382 aaPredicted RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 TCRBV7S2A1N4TA0A589 114 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 ASPDHA6ND91 283 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 MIF4GDA9UHW6 222 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 H0YIG0 161 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 I3L1I5 382 aaPredicted RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 MYO1CO00159 1063 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 FFAR3O14843 346 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 GPR42O15529 346 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 TTI1O43156 1089 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 NDUFS3O75489 264 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 PTMAP06454 111 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 ANXA5P08758 320 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 C8orf89P0DMQ9 161 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 EZRP15311 586 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 BDKRB1P46663 353 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 ADARP55265 1226 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 SRSF11Q05519 484 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 ZNF33BQ06732 778 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 CDSNQ15517 529 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 OASLQ15646 514 aaKnown RBP9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 C3AR1Q16581 482 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 TUSC1Q2TAM9 212 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 HKDC1Q2TB90 917 aa9.32□□□□□ -0.92
TRAFD1-207ENST00000550051 ACER2Q5QJU3 275 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms