RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PLAURQ03405 335 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 UAP1L1Q3KQV9 507 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 ANKS6Q68DC2 871 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 DPY19L3Q6ZPD9 716 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 ARHGAP22Q7Z5H3 698 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 HSD11B1LQ7Z5J1 315 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 GRASPQ7Z6J2 395 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 ADAT2Q7Z6V5 191 aaKnown RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 GALNT5Q7Z7M9 940 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 CEP97Q8IW35 865 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 CLYBLQ8N0X4 340 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 ADCY4Q8NFM4 1077 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 OR7G1Q8NGA0 311 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 PHF10Q8WUB8 498 aaKnown RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 C1orf159Q96HA4 380 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 RMDN2Q96LZ7 410 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 MS4A5Q9H3V2 200 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 FAM120CQ9NX05 1096 aaKnown RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 PLK2Q9NYY3 685 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 PACSIN2Q9UNF0 486 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-212ENST00000549162 LRCH1Q9Y2L9 728 aa4.71□□□□□ -1.66
SCAF11-212ENST00000549162 ARHGAP21Q5T5U3 1957 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 A0A096LPI6 279 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FAM234BA2RU67 622 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 AQP12BA6NM10 295 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 LMO7DNF2Z398 122 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 SYT5O00445 386 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 LINC01565O15544 149 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 AHCYL1O43865 530 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 SRPX2O60687 465 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 VPS26AO75436 327 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 HRGP04196 525 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 C2P06681 752 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 T-ENOLP0DO92 83 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 CTSOP43234 321 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 MSH2P43246 934 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ASMTP46597 345 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RAE1P78406 368 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ARHGAP8P85298 464 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 SP4Q02446 784 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF235Q14590 738 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FASTKD3Q14CZ7 662 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 PPP1R7Q15435 360 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 DLG2Q15700 870 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 TMEM201Q5SNT2 666 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 BROXQ5VW32 411 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 DAB2IPQ5VWQ8 1189 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FAM71E1Q6IPT2 247 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 R3HCC1LQ7Z5L2 792 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 AQP12AQ8IXF9 295 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 CCDC33Q8N5R6 958 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ATG4AQ8WYN0 398 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 TRIM63Q969Q1 353 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ARSGQ96EG1 525 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 GAS2L1Q99501 681 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 SERPINI1Q99574 410 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 APOOQ9BUR5 198 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FGFR1OP2Q9NVK5 253 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 SAE1Q9UBE0 346 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 SNX24Q9Y343 169 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 K7EPI3 171 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 HDAC3O15379 428 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 KLHL41O60662 606 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 NTN1O95631 604 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ATP1B1P05026 303 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 GSTP1P09211 210 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RPL17P18621 184 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RPS15AP62244 130 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ERVK-8P63133 956 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 BNIP2Q12982 314 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 PRKG2Q13237 762 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 TMED2Q15363 201 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 TIGD3Q6B0B8 471 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FAAH2Q6GMR7 532 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RASGEF1AQ8N9B8 481 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 PIP4K2CQ8TBX8 421 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 CSGALNACT1Q8TDX6 532 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 NAT14Q8WUY8 206 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 MARVELD3Q96A59 401 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 PTERQ96BW5 349 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 TREX2Q9BQ50 279 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF426Q9BUY5 554 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 NMUR2Q9GZQ4 415 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RUBCNLQ9H714 662 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 SLC28A3Q9HAS3 691 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 B4GALT6Q9UBX8 382 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ADAM21Q9UKJ8 722 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 MAGED1Q9Y5V3 778 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 TANC2Q9HCD6 1990 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FIGNL2A6NMB9 653 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ACOT8O14734 319 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 RHOBTB1O94844 696 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF682O95780 498 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 OTCP00480 354 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 C6P13671 934 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 IDO1P14902 403 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 CXCR2P25025 360 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 FKBP2P26885 142 aaKnown RBP4.7□□□□□ -1.66
SCAF11-212ENST00000549162 ACVR2AP27037 513 aa4.7□□□□□ -1.66
SCAF11-212ENST00000549162 PEX2P28328 305 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms