RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 THEMIS2Q5TEJ8 643 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 ICE2Q659A1 982 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 ZNF470Q6ECI4 717 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 KIAA0930Q6ICG6 404 aaPredicted RBP19.36■□□□□ 0.69
SSH1-207ENST00000547862 C4orf22Q6V702 233 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 NDUFAF7Q7L592 441 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 BCORP1Q8N888 145 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 SLC30A3Q99726 388 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.36■□□□□ 0.69
SSH1-207ENST00000547862 ENAMQ9NRM1 1142 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 C14orf105Q9NVL8 296 aa19.36■□□□□ 0.69
SSH1-207ENST00000547862 SCN3AQ9NY46 2000 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 CTAGE9A4FU28 777 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 MYO1CO00159 1063 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 SMAPO00193 183 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 HAT1O14929 419 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 CEP104O60308 925 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 PSIP1O75475 530 aaKnown RBP19.35■□□□□ 0.69
SSH1-207ENST00000547862 JRKO75564 520 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 CCNDBP1O95273 360 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 CXCR5P32302 372 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 MFSD4BQ5TF39 518 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 ATG9BQ674R7 924 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 DRICH1Q6PGQ1 229 aaPredicted RBP19.35■□□□□ 0.69
SSH1-207ENST00000547862 CENPUQ71F23 418 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 AMER3Q8N944 861 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 LMF1Q96S06 567 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 DRC3Q9H069 523 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 FBXO6Q9NRD1 293 aaPredicted RBP19.35■□□□□ 0.69
SSH1-207ENST00000547862 RIC8BQ9NVN3 520 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 SAMD15Q9P1V8 674 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 CREBBPQ92793 2442 aa19.35■□□□□ 0.69
SSH1-207ENST00000547862 IGLV3-12A0A075B6K2 115 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 IGHV1-45A0A0A0MS14 117 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 WFS1O76024 890 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 SLC16A8O95907 504 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 EZRP15311 586 aaKnown RBP19.34■□□□□ 0.69
SSH1-207ENST00000547862 SOX11P35716 441 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 GPS1Q13098 491 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 ANKRD22Q5VYY1 191 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 CILP2Q8IUL8 1156 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 ZC3H7AQ8IWR0 971 aaKnown RBP19.34■□□□□ 0.69
SSH1-207ENST00000547862 REXO1L1PQ8IX06 675 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 GIMAP7Q8NHV1 300 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 ZNF480Q8WV37 535 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 MAIP1Q8WWC4 291 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 TCF12Q99081 682 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 SLX1AQ9BQ83 275 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 CCDC68Q9H2F9 335 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 MKL2Q9ULH7 1088 aa19.34■□□□□ 0.69
SSH1-207ENST00000547862 ZNF839A8K0R7 811 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 GOLGA8MH3BSY2 632 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 PHF2O75151 1096 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 SERPINA7P05543 415 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 ITGAMP11215 1152 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 THOC5Q13769 683 aaKnown RBP19.33■□□□□ 0.68
SSH1-207ENST00000547862 DHX34Q14147 1143 aaKnown RBP19.33■□□□□ 0.68
SSH1-207ENST00000547862 ZRSR2Q15696 482 aaKnown RBP19.33■□□□□ 0.68
SSH1-207ENST00000547862 TTLL9Q3SXZ7 439 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 ZNF425Q6IV72 752 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 NEPROQ6NW34 567 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 DENND6AQ8IWF6 608 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 SRRM1Q8IYB3 904 aaKnown RBP19.33■□□□□ 0.68
SSH1-207ENST00000547862 PSMF1Q92530 271 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 MVB12AQ96EY5 273 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 TAAR6Q96RI8 345 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 MKKSQ9NPJ1 570 aaPredicted RBP19.33■□□□□ 0.68
SSH1-207ENST00000547862 UTP6Q9NYH9 597 aaKnown RBP19.33■□□□□ 0.68
SSH1-207ENST00000547862 ZKSCAN5Q9Y2L8 839 aa19.33■□□□□ 0.68
SSH1-207ENST00000547862 MRPS2Q9Y399 296 aaKnown RBP19.33■□□□□ 0.68
SSH1-207ENST00000547862 SCN2AQ99250 2005 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 TRAV17A0A0B4J275 112 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 ENO4A6NNW6 628 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 FOXS1O43638 330 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 TNFSF10P50591 281 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 CLCN7P51798 805 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 SARNPP82979 210 aaKnown RBP19.32■□□□□ 0.68
SSH1-207ENST00000547862 CDK16Q00536 496 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 CTBP1Q13363 440 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 ARHGAP19Q14CB8 494 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 HIBCHQ6NVY1 386 aaPredicted RBP19.32■□□□□ 0.68
SSH1-207ENST00000547862 GFRALQ6UXV0 394 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 NEK10Q6ZWH5 1172 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 MARVELD3Q96A59 401 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 OR2A5Q96R48 311 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 INTS10Q9NVR2 710 aaKnown RBP19.32■□□□□ 0.68
SSH1-207ENST00000547862 SH3BGRL2Q9UJC5 107 aa19.32■□□□□ 0.68
SSH1-207ENST00000547862 IGHV3-20A0A0C4DH32 117 aa19.31■□□□□ 0.68
SSH1-207ENST00000547862 PRSS44E7EML9 344 aa19.31■□□□□ 0.68
SSH1-207ENST00000547862 SEC24DO94855 1032 aaPredicted RBP19.31■□□□□ 0.68
SSH1-207ENST00000547862 BMP10O95393 424 aa19.31■□□□□ 0.68
SSH1-207ENST00000547862 FDXRP22570 491 aa19.31■□□□□ 0.68
SSH1-207ENST00000547862 SLC26A3P40879 764 aa19.31■□□□□ 0.68
SSH1-207ENST00000547862 TDGF1P3P51864 188 aa19.31■□□□□ 0.68
SSH1-207ENST00000547862 EFNA3P52797 238 aa19.31■□□□□ 0.68
SSH1-207ENST00000547862 EMP3P54852 163 aa19.31■□□□□ 0.68
SSH1-207ENST00000547862 ADARP55265 1226 aaKnown RBP19.31■□□□□ 0.68
SSH1-207ENST00000547862 SNRPNP63162 240 aaKnown RBP19.31■□□□□ 0.68
SSH1-207ENST00000547862 PRDX1Q06830 199 aaKnown RBP19.31■□□□□ 0.68
SSH1-207ENST00000547862 PCOLCEQ15113 449 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms