RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CTAG2O75638 210 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 BMP10O95393 424 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 LY6G6DO95868 133 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 IFNA2P01563 188 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PDHA1P08559 390 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ICAM2P13598 275 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ST6GAL1P15907 406 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ERCC2P18074 760 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 POLR2CP19387 275 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 MMP8P22894 467 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 IL4RP24394 825 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PRDX3P30048 256 aaKnown RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 SERPINB6P35237 376 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 NSG1P42857 185 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 LMAN1P49257 510 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 RAB28P51157 221 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 NDUFA8P51970 172 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ARSFP54793 590 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 MANFP55145 182 aaKnown RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 CDH6P55285 790 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 MAXP61244 160 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 NOMO3P69849 1222 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 TFF3Q07654 80 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 AP1B1Q10567 949 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PIN1Q13526 163 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 KEAP1Q14145 624 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 GALNT3Q14435 633 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 KRT33BQ14525 404 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PCBP2Q15366 365 aaKnown RBP eCLIP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 C2CD6Q53TS8 623 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ABHD17BQ5VST6 288 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 TAF3Q5VWG9 929 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 NAA35Q5VZE5 725 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 VASNQ6EMK4 673 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 GJB7Q6PEY0 223 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 KIRREL2Q6UWL6 708 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PAMR1Q6UXH9 720 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 RFX8Q6ZV50 586 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF677Q86XU0 584 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 LRRC49Q8IUZ0 686 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF547Q8IVP9 402 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 FAM71AQ8IYT1 594 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ATPAF2Q8N5M1 289 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 DTX3Q8N9I9 347 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ACVR1CQ8NER5 493 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 WFDC11Q8NEX6 87 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 OR11G2Q8NGC1 345 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 JOSD2Q8TAC2 188 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 TMEM158Q8WZ71 300 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 C12orf66Q96MD2 445 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 VPS35Q96QK1 796 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 DMRTA2Q96SC8 542 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 DIRC2Q96SL1 478 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 CRACR2AQ9BSW2 395 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 CNPY3Q9BT09 278 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 NUP85Q9BW27 656 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ADGRE3Q9BY15 652 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PITPNM3Q9BZ71 974 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 POLR1EQ9GZS1 481 aaKnown RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 CHRNA10Q9GZZ6 450 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 SLC26A1Q9H2B4 701 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 EPB41L4BQ9H329 900 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 SRMSQ9H3Y6 488 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 POFUT1Q9H488 388 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ZWILCHQ9H900 591 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PCDH18Q9HCL0 1135 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 RASSF1Q9NS23 344 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 IMP3Q9NV31 184 aaKnown RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 IRAK4Q9NWZ3 460 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 GALNT8Q9NY28 637 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 TAS2R14Q9NYV8 317 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 IL1RAPL1Q9NZN1 696 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 IL17CQ9P0M4 197 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PTGFRNQ9P2B2 879 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 NFKBIL1Q9UBC1 381 aaPredicted RBP3.9□□□□□ -1.79
SNHG1-220ENST00000544550 SLC24A2Q9UI40 661 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 DNAJC12Q9UKB3 198 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 ACSL5Q9ULC5 683 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 CDYLQ9Y232 598 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 PLEKHA6Q9Y2H5 1048 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 HS3ST3B1Q9Y662 390 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 SVILO95425 2214 aa3.9□□□□□ -1.79
SNHG1-220ENST00000544550 A0A1B0GX78 115 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 SIGLEC16A6NMB1 481 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 FAM227AF5H4B4 570 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 DDX3XO00571 662 aaKnown RBP eCLIP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CCP110O43303 1012 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ASNA1O43681 348 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 KLK8O60259 260 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CNOT3O75175 753 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 H2AFYO75367 372 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 MTX2O75431 263 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 POP7O75817 140 aaKnown RBP3.89□□□□□ -1.79
SNHG1-220ENST00000544550 TOXO94900 526 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 WDPCPO95876 746 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 ONECUT2O95948 504 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 PEX11BO96011 259 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 SERPINA7P05543 415 aa3.89□□□□□ -1.79
SNHG1-220ENST00000544550 CALB1P05937 261 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms