RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 COPEO14579 308 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 HAT1O14929 419 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 RGS16O15492 202 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 TLX3O43711 291 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 OR2B3O76000 313 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 STK17BO94768 372 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 H2AFXP16104 143 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 ZNF28P17035 718 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 GNAZP19086 355 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 PCBP2Q15366 365 aaKnown RBP eCLIP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 PDK4Q16654 411 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 CATSPEREQ5SY80 951 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 METTL2BQ6P1Q9 378 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 NXPE4Q6UWF7 544 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 TMEM126BQ8IUX1 230 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 SRRM1Q8IYB3 904 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 GPR135Q8IZ08 494 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 C4orf33Q8N1A6 199 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 PTGR2Q8N8N7 351 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 SNIP1Q8TAD8 396 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 ZNF285Q96NJ3 590 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 SELENOSQ9BQE4 189 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 ULBP3Q9BZM4 244 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 SPRTNQ9H040 489 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 PELI2Q9HAT8 420 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 ENAMQ9NRM1 1142 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 ARGLU1Q9NWB6 273 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 MKS1Q9NXB0 559 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 OPTCQ9UBM4 332 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 EMCNQ9ULC0 261 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 GRID1Q9ULK0 1009 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 TMEM184BQ9Y519 407 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 PCDHB3Q9Y5E6 796 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 TNPO3Q9Y5L0 923 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 CHD8Q9HCK8 2581 aa16.39■□□□□ 0.21
RABGGTA-203ENST00000543002 E7EQ34 232 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 STX16-NPEPL1H3BU86 382 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 K7EPI3 171 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 STX16O14662 325 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 SCRG1O75711 98 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 KIAA0754O94854 1291 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 CTSBP07858 339 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 TAC1P20366 129 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 PCBP4P57723 403 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 RPS15AP62244 130 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 CASP8Q14790 479 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 TCTE1Q5JU00 501 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 FRMPD2BQ6IN97 320 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 TLDC1Q6P9B6 456 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 SLCO4C1Q6ZQN7 724 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 TMPRSS11BQ86T26 416 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 ZFAND4Q86XD8 727 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 PLD3Q8IV08 490 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 SNX31Q8N9S9 440 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 PHF21BQ96EK2 531 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 OR2A5Q96R48 311 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 SARGQ9BW04 601 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 SENP1Q9P0U3 644 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 AP1M2Q9Y6Q5 423 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 FRYQ5TBA9 3013 aa16.38■□□□□ 0.21
RABGGTA-203ENST00000543002 KCNE1BA0A087WTH5 132 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 LOC105369274A0A096LPK9 316 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 LOC102723532A0A0G2JNH3 316 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 LRRC14BA6NHZ5 514 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 H0YGG7 62 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 STMND1H3BQB6 276 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 CLGNO14967 610 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 ZSCAN9O15535 394 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 DLGAP3O95886 979 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 PROCP04070 461 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 C1GALT1C1LP0DN25 315 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 SPTBP11277 2137 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 EPORP19235 508 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 GRK3P35626 688 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 VSX2P58304 361 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 ARF3P61204 181 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 NFKB2Q00653 900 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 CCDC153Q494R4 210 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 PRAMEF17Q5VTA0 474 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 ATG9BQ674R7 924 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 OR4N4Q8N0Y3 316 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 BANPQ8N9N5 519 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 KDF1Q8NAX2 398 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 ZCCHC14Q8WYQ9 949 aaKnown RBP16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 THAP11Q96EK4 314 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 PGM2Q96G03 612 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 APOPT1Q96IL0 206 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 EHD1Q9H4M9 534 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 SYNPO2LQ9H987 977 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 IRAK4Q9NWZ3 460 aa16.37■□□□□ 0.21
RABGGTA-203ENST00000543002 AHCTF1Q8WYP5 2266 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 TRBC2A0A5B9 178 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 A8MT66 165 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 ZNF749O43361 778 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 DLX3O60479 287 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 PLIN3O60664 434 aa16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 CPNE3O75131 537 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 H2AFYO75367 372 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 SIX3O95343 332 aaPredicted RBP16.36■□□□□ 0.21
RABGGTA-203ENST00000543002 APC2O95996 2303 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms