RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 KRTCAP3Q53RY4 240 aa25.42■■□□□ 1.66
CHFR-218ENST00000540963 Q6ZPB1 254 aaPredicted RBP25.42■■□□□ 1.66
CHFR-218ENST00000540963 TAB3Q8N5C8 712 aaPredicted RBP25.42■■□□□ 1.66
CHFR-218ENST00000540963 LRRC57Q8N9N7 239 aa25.42■■□□□ 1.66
CHFR-218ENST00000540963 MMABQ96EY8 250 aaPredicted RBP25.42■■□□□ 1.66
CHFR-218ENST00000540963 C14orf79Q96F83 325 aa25.42■■□□□ 1.66
CHFR-218ENST00000540963 ZNF835Q9Y2P0 537 aa25.42■■□□□ 1.66
CHFR-218ENST00000540963 FAM53BQ14153 422 aa25.41■■□□□ 1.66
CHFR-218ENST00000540963 FAAH2Q6GMR7 532 aa25.41■■□□□ 1.66
CHFR-218ENST00000540963 ARHGEF39Q8N4T4 335 aa25.41■■□□□ 1.66
CHFR-218ENST00000540963 UBL4BQ8N7F7 174 aa25.41■■□□□ 1.66
CHFR-218ENST00000540963 MTFMTQ96DP5 389 aaKnown RBP25.41■■□□□ 1.66
CHFR-218ENST00000540963 DRC3Q9H069 523 aa25.41■■□□□ 1.66
CHFR-218ENST00000540963 ETNK1Q9HBU6 452 aa25.41■■□□□ 1.66
CHFR-218ENST00000540963 MRPS30Q9NP92 439 aaKnown RBP25.41■■□□□ 1.66
CHFR-218ENST00000540963 SH3BGRL2Q9UJC5 107 aa25.41■■□□□ 1.66
CHFR-218ENST00000540963 CD3EAPO15446 510 aaKnown RBP25.4■■□□□ 1.66
CHFR-218ENST00000540963 MATN4O95460 622 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 ATP5DP30049 168 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 ZNF33BQ06732 778 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 ARHGAP19Q14CB8 494 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 TESK1Q15569 626 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 C3AR1Q16581 482 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 ZNF766Q5HY98 468 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 LRRC8BQ6P9F7 803 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 SPNS3Q6ZMD2 512 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 LDB1Q86U70 411 aaPredicted RBP25.4■■□□□ 1.66
CHFR-218ENST00000540963 PAQR7Q86WK9 346 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 ZC3H7AQ8IWR0 971 aaKnown RBP25.4■■□□□ 1.66
CHFR-218ENST00000540963 PPHLN1Q8NEY8 458 aaKnown RBP25.4■■□□□ 1.66
CHFR-218ENST00000540963 SMPDL3AQ92484 453 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 MAGED4Q96JG8 741 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 MARCH4Q9P2E8 410 aaPredicted RBP25.4■■□□□ 1.66
CHFR-218ENST00000540963 MKL2Q9ULH7 1088 aa25.4■■□□□ 1.66
CHFR-218ENST00000540963 R3HDM2Q9Y2K5 976 aaKnown RBP25.4■■□□□ 1.66
CHFR-218ENST00000540963 GRID2IPA4D2P6 1211 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 MIF4GDA9UHW6 222 aaKnown RBP25.39■■□□□ 1.66
CHFR-218ENST00000540963 E7EVH7 732 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 FOXS1O43638 330 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 CLDN14O95500 239 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 C8orf89P0DMQ9 161 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 EZRP15311 586 aaKnown RBP25.39■■□□□ 1.66
CHFR-218ENST00000540963 FASTKQ14296 549 aaKnown RBP25.39■■□□□ 1.66
CHFR-218ENST00000540963 PLAG1Q6DJT9 500 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 H3F3CQ6NXT2 135 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 NEK10Q6ZWH5 1172 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 OR9A1PQ8NGU1 263 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 ADAMTS18Q8TE60 1221 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 METTL21AQ8WXB1 218 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 RERGQ96A58 199 aaPredicted RBP25.39■■□□□ 1.66
CHFR-218ENST00000540963 ZNF354BQ96LW1 612 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 GPR137Q96N19 417 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 OR2A5Q96R48 311 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 ITGB1BP2Q9UKP3 347 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 AMFRQ9UKV5 643 aa25.39■■□□□ 1.66
CHFR-218ENST00000540963 GTF3C1Q12789 2109 aa25.39■■□□□ 1.65
CHFR-218ENST00000540963 ZFHX3Q15911 3703 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 FFAR3O14843 346 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 GPR42O15529 346 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 CCNDBP1O95273 360 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 IPO7O95373 1038 aaKnown RBP25.38■■□□□ 1.65
CHFR-218ENST00000540963 HSD17B2P37059 387 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 GRIA1P42261 906 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 YBX1P67809 324 aaKnown RBP25.38■■□□□ 1.65
CHFR-218ENST00000540963 GBX1Q14549 363 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 HKDC1Q2TB90 917 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 KRTAP21-3Q3LHN1 58 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 ANKRD20A4Q4UJ75 823 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 ZNF425Q6IV72 752 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 SPOCK3Q9BQ16 436 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 ACAT2Q9BWD1 397 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 GPAMQ9HCL2 828 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 TINAGQ9UJW2 476 aa25.38■■□□□ 1.65
CHFR-218ENST00000540963 RUVBL2Q9Y230 463 aaKnown RBP25.38■■□□□ 1.65
CHFR-218ENST00000540963 KRT87PA6NCN2 255 aa25.37■■□□□ 1.65
CHFR-218ENST00000540963 TTI1O43156 1089 aa25.37■■□□□ 1.65
CHFR-218ENST00000540963 NDUFS3O75489 264 aa25.37■■□□□ 1.65
CHFR-218ENST00000540963 RPA3P35244 121 aaPredicted RBP25.37■■□□□ 1.65
CHFR-218ENST00000540963 PMP22Q01453 160 aa25.37■■□□□ 1.65
CHFR-218ENST00000540963 PRDX1Q06830 199 aaKnown RBP25.37■■□□□ 1.65
CHFR-218ENST00000540963 PCID2Q5JVF3 399 aa25.37■■□□□ 1.65
CHFR-218ENST00000540963 SPPL2CQ8IUH8 684 aa25.37■■□□□ 1.65
CHFR-218ENST00000540963 FRMD8P1Q9BZ68 369 aaPredicted RBP25.37■■□□□ 1.65
CHFR-218ENST00000540963 C19orf25Q9UFG5 118 aaPredicted RBP25.37■■□□□ 1.65
CHFR-218ENST00000540963 MEMO1Q9Y316 297 aa25.37■■□□□ 1.65
CHFR-218ENST00000540963 A0A0A6YYC8 382 aaPredicted RBP25.36■■□□□ 1.65
CHFR-218ENST00000540963 IGKV1-8A0A0C4DH67 115 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 ASPDHA6ND91 283 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 ZNF839A8K0R7 811 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 H0YIG0 161 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 I3L1I5 382 aaPredicted RBP25.36■■□□□ 1.65
CHFR-218ENST00000540963 MYO1CO00159 1063 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 NDUFA9Q16795 377 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 PEX26Q7Z412 305 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 MDS2Q8NDY4 140 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 CHRAC1Q9NRG0 131 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 FAM114A2Q9NRY5 505 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 TREX1Q9NSU2 369 aa25.36■■□□□ 1.65
CHFR-218ENST00000540963 H3BMM5 538 aa25.35■■□□□ 1.65
CHFR-218ENST00000540963 AVPR1BP47901 424 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms