RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 OPTCQ9UBM4 332 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 DKK4Q9UBT3 224 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 ANGPTL3Q9Y5C1 460 aa14.86□□□□□ -0.03
DDB1-218ENST00000540784 C1QTNF9BB2RNN3 333 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 E7EQ34 232 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 TK2O00142 265 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 SBK3P0C264 359 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 C1QTNF9P0C862 333 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 C1GALT1C1LP0DN25 315 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 EZRP15311 586 aaKnown RBP14.85□□□□□ -0.03
DDB1-218ENST00000540784 H2AFXP16104 143 aaPredicted RBP14.85□□□□□ -0.03
DDB1-218ENST00000540784 CD82P27701 267 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 PCBP2Q15366 365 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDB1-218ENST00000540784 PDK4Q16654 411 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 CCDC153Q494R4 210 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 TCTE1Q5JU00 501 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 METTL2BQ6P1Q9 378 aaKnown RBP14.85□□□□□ -0.03
DDB1-218ENST00000540784 TLDC1Q6P9B6 456 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 HDXQ7Z353 690 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 TMEM126BQ8IUX1 230 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 HOMEZQ8IX15 550 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 TBC1D19Q8N5T2 526 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 TEX9Q8N6V9 391 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 BANPQ8N9N5 519 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 UBTD2Q8WUN7 234 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 RUFY1Q96T51 708 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 SLC7A5P2Q9GIP4 190 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 IQCGQ9H095 443 aaKnown RBP14.85□□□□□ -0.03
DDB1-218ENST00000540784 PELI2Q9HAT8 420 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 SENP1Q9P0U3 644 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 AP1M2Q9Y6Q5 423 aa14.85□□□□□ -0.03
DDB1-218ENST00000540784 KIF26BQ2KJY2 2108 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 PCM1Q15154 2024 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 KCNE1BA0A087WTH5 132 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 LOC105369274A0A096LPK9 316 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 LOC102723532A0A0G2JNH3 316 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 GOLGA6L10A6NI86 522 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 H0YGG7 62 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 STX16-NPEPL1H3BU86 382 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 STX16O14662 325 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 HAT1O14929 419 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 NRP2O60462 931 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 SCRG1O75711 98 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 STK17BO94768 372 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 NTRK1P04629 796 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 EIF2S1P05198 315 aaKnown RBP14.84□□□□□ -0.03
DDB1-218ENST00000540784 MYZAPP0CAP1 466 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 EPB42P16452 691 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 ATP5F1P24539 256 aaPredicted RBP14.84□□□□□ -0.03
DDB1-218ENST00000540784 CXCR2P25025 360 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 EEF1DP29692 281 aaKnown RBP14.84□□□□□ -0.03
DDB1-218ENST00000540784 VSX2P58304 361 aaPredicted RBP14.84□□□□□ -0.03
DDB1-218ENST00000540784 ARF3P61204 181 aaPredicted RBP14.84□□□□□ -0.03
DDB1-218ENST00000540784 RPS15AP62244 130 aaKnown RBP14.84□□□□□ -0.03
DDB1-218ENST00000540784 WASHC2DQ5SRD0 308 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 FRMPD2BQ6IN97 320 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 SLCO4C1Q6ZQN7 724 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 RNF44Q7L0R7 432 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 TMPRSS11BQ86T26 416 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 ZFAND4Q86XD8 727 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 PLD3Q8IV08 490 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 OR4N4Q8N0Y3 316 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 CCDC63Q8NA47 563 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 RERGQ96A58 199 aaPredicted RBP14.84□□□□□ -0.03
DDB1-218ENST00000540784 THAP11Q96EK4 314 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 PGM2Q96G03 612 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 OR2A5Q96R48 311 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 AIF1LQ9BQI0 150 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 ULBP3Q9BZM4 244 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 STMN4Q9H169 189 aaPredicted RBP14.84□□□□□ -0.03
DDB1-218ENST00000540784 EMCNQ9ULC0 261 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 ASB1Q9Y576 335 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 NCOR2Q9Y618 2525 aa14.84□□□□□ -0.03
DDB1-218ENST00000540784 ANKRD12Q6UB98 2062 aa14.83□□□□□ -0.03
DDB1-218ENST00000540784 FEZF1A0PJY2 475 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 LRRC14BA6NHZ5 514 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 STMND1H3BQB6 276 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 ZNF749O43361 778 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 OR1F1O43749 312 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 LCMT2O60294 686 aaKnown RBP14.83□□□□□ -0.04
DDB1-218ENST00000540784 DLX3O60479 287 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 SPAG7O75391 227 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 KIAA0754O94854 1291 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 SIX3O95343 332 aaPredicted RBP14.83□□□□□ -0.04
DDB1-218ENST00000540784 TIAF1O95411 115 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 PROCP04070 461 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 CAPNS1P04632 268 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 CTSBP07858 339 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 HBQ1P09105 142 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 ZNF28P17035 718 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 PIK3CGP48736 1102 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 MEF2AQ02078 507 aaPredicted RBP14.83□□□□□ -0.04
DDB1-218ENST00000540784 IRF8Q02556 426 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 GTF2H2Q13888 395 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 XKR6Q5GH73 641 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 ATG9BQ674R7 924 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 GTF2H2CQ6P1K8 395 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 SLC22A9Q8IVM8 553 aa14.83□□□□□ -0.04
DDB1-218ENST00000540784 ZNF655Q8N720 491 aaPredicted RBP14.83□□□□□ -0.04
DDB1-218ENST00000540784 CLIP3Q96DZ5 547 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms