RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 KCNA7Q96RP8 456 aa18.19■□□□□ 0.5
TNFRSF1A-213ENST00000540022 DPH7Q9BTV6 452 aa18.19■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CEP295Q9C0D2 2601 aa18.19■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SPNS1Q9H2V7 528 aa18.19■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PNPOQ9NVS9 261 aa18.19■□□□□ 0.5
TNFRSF1A-213ENST00000540022 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1A-213ENST00000540022 KCNE1BA0A087WTH5 132 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 NRP2O60462 931 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 UGDHO60701 494 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PVRP15151 417 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 MAGP20916 626 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 GRIA3P42263 894 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CSNK1G2P78368 415 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 MEF2AQ02078 507 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TBCCQ15814 346 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 LIPJQ5W064 366 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CLEC6AQ6EIG7 209 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FAM129CQ86XR2 697 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PTCD3Q96EY7 689 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CHMP6Q96FZ7 201 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 MAP3K3Q99759 626 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 LRRN3Q9H3W5 708 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 EHD1Q9H4M9 534 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PELI2Q9HAT8 420 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FGFR1OP2Q9NVK5 253 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 MARCOQ9UEW3 520 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TRPS1Q9UHF7 1281 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FIS1Q9Y3D6 152 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TRAF6Q9Y4K3 522 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TIMM22Q9Y584 194 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 A0A0J9YY10 115 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZW10O43264 779 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 KIF1CO43896 1103 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FKBP9O95302 570 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 RPLP0P05388 317 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CAPN1P07384 714 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FGF4P08620 206 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 JUPP14923 745 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 RPL14P50914 215 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CCR8P51685 355 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SQSTM1Q13501 440 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SLBPQ14493 270 aaKnown RBP eCLIP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CPSF6Q16630 551 aaKnown RBP eCLIP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TUBB8Q3ZCM7 444 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 GGTA1PQ4G0N0 100 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 GRHL2Q6ISB3 625 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZNF425Q6IV72 752 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FAM92BQ6ZTR7 304 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ADCK2Q7Z695 626 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CRLF3Q8IUI8 442 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZNF740Q8NDX6 193 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 OR4K1Q8NGD4 311 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TGM7Q96PF1 710 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 NUDT22Q9BRQ3 303 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 KLHL25Q9H0H3 589 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TMEM184CQ9NVA4 438 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 GEMIN8Q9NWZ8 242 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TMEM9Q9P0T7 183 aa18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ATXN7L1Q9ULK2 861 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FRYQ5TBA9 3013 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SPAARA0A1B0GVQ0 90 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FFAR3O14843 346 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 AZIN1O14977 448 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 GPR42O15529 346 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TNFSF14O43557 240 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SHOX2O60902 331 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 C9P02748 559 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 KITP10721 976 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 HGFP14210 728 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 HOXB3P14651 431 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CDH3P22223 829 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SERPINB3P29508 390 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 HNF4AP41235 474 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ACADVLP49748 655 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TCHHL1Q5QJ38 904 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 KANK2Q63ZY3 851 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TMPRSS9Q7Z410 1059 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PLXDC1Q8IUK5 500 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 CLYBLQ8N0X4 340 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PIWIL2Q8TC59 973 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 METTL6Q8TCB7 284 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZDHHC12Q96GR4 267 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 EFCAB11Q9BUY7 163 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TOR4AQ9NXH8 423 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 KLHL3Q9UH77 587 aa18.17■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ASPMQ8IZT6 3477 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 COL5A1P20908 1838 aaPredicted RBP18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 GMNCA6NCL1 334 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 PRAMEF10O60809 474 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ENO1P06733 434 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 GP1BAP07359 652 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ST6GAL1P15907 406 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 HRH2P25021 359 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 SHC2P98077 582 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 TRIP6Q15654 476 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 ZRSR2Q15696 482 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 UGT3A2Q3SY77 523 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FCRL6Q6DN72 434 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 FIGLAQ6QHK4 219 aa18.16■□□□□ 0.5
TNFRSF1A-213ENST00000540022 WDR74Q6RFH5 385 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms