RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 C14orf105Q9NVL8 296 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 INTS10Q9NVR2 710 aaKnown RBP11.9□□□□□ -0.5
VAMP1-206ENST00000538970 TRPC4Q9UBN4 977 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 CDC14AQ9UNH5 594 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 VPS9D1Q9Y2B5 631 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 MED16Q9Y2X0 877 aa11.9□□□□□ -0.5
VAMP1-206ENST00000538970 CELSR1Q9NYQ6 3014 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 IGHV1-45A0A0A0MS14 117 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 ZNF839A8K0R7 811 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 E7ENX8 843 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 CEP104O60308 925 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 CCNDBP1O95273 360 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 SLC16A8O95907 504 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 SERPINA7P05543 415 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 F7P08709 466 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 CCDC175P0C221 793 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 PRR35P0CG20 571 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 PRF1P14222 555 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 EZRP15311 586 aaKnown RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 FDXRP22570 491 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 HSD17B2P37059 387 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 SLC26A3P40879 764 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 VPS41P49754 854 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 EMP2P54851 167 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 TAP2Q03519 686 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 EEF1A2Q05639 463 aaKnown RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 PRDX1Q06830 199 aaKnown RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 GPS1Q13098 491 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 TSTA3Q13630 321 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 TTLL9Q3SXZ7 439 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 GARNL3Q5VVW2 1013 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 ANKRD22Q5VYY1 191 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 ZNF470Q6ECI4 717 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 CASC4Q6P4E1 433 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 FAM180AQ6UWF9 173 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 NEK10Q6ZWH5 1172 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 CAND1Q86VP6 1230 aaKnown RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 REXO1L1PQ8IX06 675 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 PPFIBP2Q8ND30 876 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 BRIX1Q8TDN6 353 aaKnown RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 PSMF1Q92530 271 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 ZNF669Q96BR6 464 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 HOMER3Q9NSC5 361 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 PTGFRNQ9P2B2 879 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 PCYOX1Q9UHG3 505 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 OSGIN2Q9Y236 505 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 MRPS2Q9Y399 296 aaKnown RBP11.89□□□□□ -0.51
VAMP1-206ENST00000538970 NF1P21359 2839 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 ITPR3Q14573 2671 aa11.89□□□□□ -0.51
VAMP1-206ENST00000538970 LOC102723996A0A087X1L8 192 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 A0A0A6YYC8 382 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 ZCWPW2A0A1B0GU75 182 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 FAM237BA0A1B0GVD1 139 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 I3L1I5 382 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 SMAPO00193 183 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 HAT1O14929 419 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 P2RX6O15547 441 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 LRRTM2O43300 516 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 FOXS1O43638 330 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 MLNP12872 115 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 CXCR2P25025 360 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 CXCR5P32302 372 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 EFNA3P52797 238 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 ARG2P78540 354 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 ABATP80404 500 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 SARNPP82979 210 aaKnown RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 RELAQ04206 551 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 CUL1Q13616 776 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 DHX34Q14147 1143 aaKnown RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 TTC27Q6P3X3 843 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 ZNF549Q6P9A3 640 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 SPNS2Q8IVW8 549 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 DENND6AQ8IWF6 608 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 ZC3H7AQ8IWR0 971 aaKnown RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 LRRC56Q8IYG6 542 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 BCORP1Q8N888 145 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 TRIM58Q8NG06 486 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 OR1N1Q8NGS0 311 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 ASB11Q8WXH4 323 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 KCNJ9Q92806 393 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 RERGQ96A58 199 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 MMABQ96EY8 250 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 YIPF2Q9BWQ6 316 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 TGIF2Q9GZN2 237 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 DRC3Q9H069 523 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 MKKSQ9NPJ1 570 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 FBXO6Q9NRD1 293 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 OLAHQ9NV23 265 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 RIC8BQ9NVN3 520 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 UTP6Q9NYH9 597 aaKnown RBP11.88□□□□□ -0.51
VAMP1-206ENST00000538970 SAMD15Q9P1V8 674 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 KLHL42Q9P2K6 505 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 POLQO75417 2590 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 DOCK10Q96BY6 2186 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 POLEQ07864 2286 aa11.88□□□□□ -0.51
VAMP1-206ENST00000538970 DYTNA2CJ06 578 aa11.87□□□□□ -0.51
VAMP1-206ENST00000538970 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
VAMP1-206ENST00000538970 PCDH17O14917 1159 aa11.87□□□□□ -0.51
VAMP1-206ENST00000538970 BMP10O95393 424 aa11.87□□□□□ -0.51
VAMP1-206ENST00000538970 SYF2O95926 243 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms