RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 ARHGAP33O14559 1287 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 LSM1O15116 133 aaKnown RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 UBDO15205 165 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 TNFSF14O43557 240 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 RGS14O43566 566 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 LCMT2O60294 686 aaKnown RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 PEX11AO75192 247 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 UBOX5O94941 541 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 EPN2O95208 641 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 CFIP05156 583 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ALDOCP09972 364 aaKnown RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 CD1EP15812 388 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 PRPH2P23942 346 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 EPHA8P29322 1005 aaPredicted RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 REEP5Q00765 189 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 HMGCS1Q01581 520 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 MEF2AQ02078 507 aaPredicted RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 EMX2Q04743 252 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 KIAA0040Q15053 153 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 PLCL1Q15111 1095 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 SF1Q15637 639 aaKnown RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 SMU1Q2TAY7 513 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 C14orf28Q4W4Y0 310 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 PAGE2BQ5JRK9 111 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 C6orf132Q5T0Z8 1188 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ADNP2Q6IQ32 1131 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ZNF425Q6IV72 752 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 OGFOD2Q6N063 350 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 VN1R5Q7Z5H4 357 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 SPATA19Q7Z5L4 167 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ZNF761Q86XN6 746 aaPredicted RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 SLC22A18Q96BI1 424 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ERP27Q96DN0 273 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 CATSPER2Q96P56 530 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 AIF1LQ9BQI0 150 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 ACPTQ9BZG2 426 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 PITHD1Q9GZP4 211 aaPredicted RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 ELOVL6Q9H5J4 265 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 GAREM1Q9H706 876 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 SLC6A20Q9NP91 592 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 MRPS30Q9NP92 439 aaKnown RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 ARL8BQ9NVJ2 186 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 RIC8BQ9NVN3 520 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 HRASLS2Q9NWW9 162 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ACTR10Q9NZ32 417 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ARMCX1Q9P291 453 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ZFP69BQ9UJL9 534 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 G3BP2Q9UN86 482 aaKnown RBP11.27□□□□□ -0.61
SPARC-207ENST00000537849 TRIM33Q9UPN9 1127 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 ENTPD2Q9Y5L3 495 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 R4GN57 208 aa11.27□□□□□ -0.61
SPARC-207ENST00000537849 LILRA5A6NI73 299 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 TRIM38O00635 465 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 CCNDBP1O95273 360 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 TBX6O95947 436 aaPredicted RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 UGT2B7P16662 529 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 HRH2P25021 359 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 CXCR2P25025 360 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 CMPK1P30085 196 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 ADSLP30566 484 aaPredicted RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 GRIA3P42263 894 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 LSSP48449 732 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 BNIP1Q12981 228 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 KLF10Q13118 480 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 UBAP2LQ14157 1087 aaKnown RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 KRT72Q14CN4 511 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 AP5B1Q2VPB7 878 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 RFTN2Q52LD8 501 aaPredicted RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 LACTB2Q53H82 288 aaPredicted RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 TRIM61Q5EBN2 209 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 FBXO42Q6P3S6 717 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 TMIGD1Q6UXZ0 262 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 ZNF771Q7L3S4 317 aaPredicted RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 ZNF438Q7Z4V0 828 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 PAQR7Q86WK9 346 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 GATAD2AQ86YP4 633 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 SLC35F3Q8IY50 421 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 KRT78Q8N1N4 520 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 GBP7Q8N8V2 638 aaPredicted RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 KYQ8NBH2 561 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 HUS1BQ8NHY5 278 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 UBE2E3Q969T4 207 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 MARK4Q96L34 752 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 PPP3R2Q96LZ3 170 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 MTERF1Q99551 399 aaKnown RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 DPH7Q9BTV6 452 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 SARGQ9BW04 601 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 ARRDC1-AS1Q9H2J1 176 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 BRF2Q9HAW0 419 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 PPT2Q9UMR5 302 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 SNX7Q9UNH6 387 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 KLK4Q9Y5K2 254 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 GPR45Q9Y5Y3 372 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 COPG1Q9Y678 874 aaKnown RBP11.26□□□□□ -0.61
SPARC-207ENST00000537849 RNF215Q9Y6U7 377 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 GPR179Q6PRD1 2367 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 LAMA1P25391 3075 aa11.26□□□□□ -0.61
SPARC-207ENST00000537849 TRBC2A0A5B9 178 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms