RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 RPS19BP1Q86WX3 136 aaKnown RBP8.62□□□□□ -1.03
USP28-205ENST00000537706 SULF2Q8IWU5 870 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 OR5AR1Q8NGP9 310 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 ASB8Q9H765 288 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 RWDD2AQ9UIY3 292 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 CDC42EP3Q9UKI2 254 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 ACAD8Q9UKU7 415 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 SPO11Q9Y5K1 396 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 A0A1B0GTH6 734 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 MBD3L4A6NDZ8 208 aaPredicted RBP8.62□□□□□ -1.03
USP28-205ENST00000537706 MBD3L5A6NJ08 208 aaPredicted RBP8.62□□□□□ -1.03
USP28-205ENST00000537706 TARM1B6A8C7 271 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 QSOX1O00391 747 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 ATP1B2P14415 290 aaPredicted RBP8.62□□□□□ -1.03
USP28-205ENST00000537706 RFC3P40938 356 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 ST13P50502 369 aaKnown RBP8.62□□□□□ -1.03
USP28-205ENST00000537706 MAMLD1Q13495 774 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 CCDC38Q502W7 563 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 CYP4V2Q6ZWL3 525 aaPredicted RBP8.62□□□□□ -1.03
USP28-205ENST00000537706 MAATS1Q7Z4T9 603 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 LINC01560Q8TB33 94 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 SARAFQ96BY9 339 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 SH3GL2Q99962 352 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 GSX2Q9BZM3 304 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 PCDH18Q9HCL0 1135 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 ALKBH4Q9NXW9 302 aa8.62□□□□□ -1.03
USP28-205ENST00000537706 IGHV3-20A0A0C4DH32 117 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 GPR39O43194 453 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 CD5LO43866 347 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 STATHP02808 62 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 CDK11BP21127 795 aaKnown RBP8.61□□□□□ -1.03
USP28-205ENST00000537706 BMP5P22003 454 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 PTPN3P26045 913 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 PDHA2P29803 388 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 ADH7P40394 386 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 HLCSP50747 726 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 ITGA8P53708 1063 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 TBX2Q13207 712 aaPredicted RBP8.61□□□□□ -1.03
USP28-205ENST00000537706 PAFAH1B3Q15102 231 aaKnown RBP8.61□□□□□ -1.03
USP28-205ENST00000537706 APTXQ7Z2E3 356 aaKnown RBP8.61□□□□□ -1.03
USP28-205ENST00000537706 DTWD1Q8N5C7 304 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 OR52N2Q8NGI0 321 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 OR5K2Q8NHB8 316 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 SLCO2A1Q92959 643 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 FAF2Q96CS3 445 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 IMP4Q96G21 291 aaKnown RBP8.61□□□□□ -1.03
USP28-205ENST00000537706 DACH2Q96NX9 599 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 COPS8Q99627 209 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 LPAR4Q99677 370 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 SLC25A51Q9H1U9 297 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 TRIM45Q9H8W5 580 aaPredicted RBP8.61□□□□□ -1.03
USP28-205ENST00000537706 TIMMDC1Q9NPL8 285 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 FAM215AQ9Y5M1 114 aa8.61□□□□□ -1.03
USP28-205ENST00000537706 A0A0G2JK05 382 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 A0A0J9YVX5 310 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 A8MV72 311 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 FFAR3O14843 346 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 LIN7AO14910 233 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 GPR42O15529 346 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 VPS26AO75436 327 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 RPN2P04844 631 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 TPP2P29144 1249 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 PKLRP30613 574 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 PPIAP62937 165 aaKnown RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 IFI35P80217 286 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 PLOD1Q02809 727 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 ACKR1Q16570 336 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 HYAL4Q2M3T9 481 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 MINDY4Q4G0A6 757 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 WIPI1Q5MNZ9 446 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 GARNL3Q5VVW2 1013 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 C20orf204Q6ZNR8 217 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 SLC22A16Q86VW1 577 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 ZC3H7AQ8IWR0 971 aaKnown RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 MEIOBQ8N635 442 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 ZFP62Q8NB50 900 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 BLOC1S5Q8TDH9 187 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 CYTH2Q99418 400 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 EXO5Q9H790 373 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 SCINQ9Y6U3 715 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 UQCRHLA0A096LP55 91 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 TMEM191CA6NGB0 347 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 SOWAHDA6NJG2 315 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 CCDC172P0C7W6 258 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 RARAP10276 462 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 PEBP1P30086 187 aaKnown RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 TRHRP34981 398 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 SLC26A3P40879 764 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 AVPR1BP47901 424 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 PTH2RP49190 550 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 EFNA3P52797 238 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 NDUFA9Q16795 377 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 DPY19L2P1Q6NXN4 242 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 RAB42Q8N4Z0 105 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 PPM1NQ8N819 430 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 MCOLN3Q8TDD5 553 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 ROBO4Q8WZ75 1007 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 ISL2Q96A47 359 aa8.6□□□□□ -1.03
USP28-205ENST00000537706 C16orf45Q96MC5 204 aaPredicted RBP8.6□□□□□ -1.03
USP28-205ENST00000537706 SPATA13Q96N96 652 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 438 ms