RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 BST1Q10588 318 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 DOC2AQ14183 400 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 NAA25Q14CX7 972 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 RBBP7Q16576 425 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 XKR6Q5GH73 641 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 ARL13AQ5H913 290 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-208ENST00000537429 FCRL6Q6DN72 434 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 DHRS13Q6UX07 377 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 CDK15Q96Q40 435 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 KLHL25Q9H0H3 589 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 STK38LQ9Y2H1 464 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 HEATR5BQ9P2D3 2071 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 OR2A25A4D2G3 310 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 A8MU76 341 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ITM2AO43736 263 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 UGDHO60701 494 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 KCNK5O95279 499 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 CHRNGP07510 517 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 EBLN1P0CF75 366 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 CD22P20273 847 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 VARSP26640 1264 aaKnown RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ERVPABLB-1P60509 514 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ABCE1P61221 599 aaKnown RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ZFP36L1Q07352 338 aaKnown RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ZIC1Q15915 447 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 LIPJQ5W064 366 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ATG16L1Q676U5 607 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ARHGAP22Q7Z5H3 698 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 PAQR7Q86WK9 346 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 DCBLD1Q8N8Z6 715 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 C19orf47Q8N9M1 422 aaKnown RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 L3MBTL4Q8NA19 623 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 OR4F6Q8NGB9 312 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 AGAP11Q8TF27 550 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 KLHL6Q8WZ60 621 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 PTCD3Q96EY7 689 aaKnown RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 C20orf27Q9GZN8 174 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ACTR8Q9H981 624 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 DCDC2BA2VCK2 349 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 NRP2O60462 931 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 PRAMEF10O60809 474 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 CLDN9O95484 217 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ZBTB11O95625 1053 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ANKRD34CP0C6C1 535 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 SLC1A6P48664 564 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 PDX1P52945 283 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 PKNOX1P55347 436 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 LETMD1Q6P1Q0 360 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 RBM44Q6ZP01 1051 aaKnown RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ADCK2Q7Z695 626 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 MILR1Q7Z6M3 343 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 SYVN1Q86TM6 617 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 MAGEB18Q96M61 343 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 SPNS1Q9H2V7 528 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ZNF768Q9H5H4 540 aaKnown RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 ZNF395Q9H8N7 513 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-208ENST00000537429 RNF11Q9Y3C5 154 aa23.28■■□□□ 1.32
HMGA2-208ENST00000537429 SNNO75324 88 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-208ENST00000537429 ESRRBO95718 433 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 MDH1P40925 334 aaKnown RBP23.27■■□□□ 1.32
HMGA2-208ENST00000537429 RELAQ04206 551 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 PHF19Q5T6S3 580 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 CDCP2Q5VXM1 449 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 GPRIN3Q6ZVF9 776 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 KMT5CQ86Y97 462 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 LRRC8CQ8TDW0 803 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 SLC41A2Q96JW4 573 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 CCDC74BQ96LY2 380 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 EFCAB11Q9BUY7 163 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 CHRNA10Q9GZZ6 450 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 EML4Q9HC35 981 aaKnown RBP23.27■■□□□ 1.32
HMGA2-208ENST00000537429 MID1IP1Q9NPA3 183 aa23.27■■□□□ 1.32
HMGA2-208ENST00000537429 GEMIN8Q9NWZ8 242 aaKnown RBP23.27■■□□□ 1.32
HMGA2-208ENST00000537429 PIEZO1Q92508 2521 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 LYPLA1O75608 230 aaPredicted RBP23.26■■□□□ 1.31
HMGA2-208ENST00000537429 OR4F21O95013 312 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 ARL1P40616 181 aaPredicted RBP23.26■■□□□ 1.31
HMGA2-208ENST00000537429 HNF4AP41235 474 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 MEF2AQ02078 507 aaPredicted RBP23.26■■□□□ 1.31
HMGA2-208ENST00000537429 GUCY1A3Q02108 690 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 TRA2AQ13595 282 aaKnown RBP eCLIP23.26■■□□□ 1.31
HMGA2-208ENST00000537429 GGTA1PQ4G0N0 100 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 GRHL2Q6ISB3 625 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 B3GNT8Q7Z7M8 397 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 ZNF740Q8NDX6 193 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 GRAMD1AQ96CP6 724 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 TCTN2Q96GX1 697 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 TMEM74Q96NL1 305 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 AIF1LQ9BQI0 150 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 SARGQ9BW04 601 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 SHCBP1LQ9BZQ2 653 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 FAM60AQ9NP50 221 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 TNFRSF12AQ9NP84 129 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 THAP1Q9NVV9 213 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 BTRCQ9Y297 605 aa23.26■■□□□ 1.31
HMGA2-208ENST00000537429 SNUPNO95149 360 aaKnown RBP23.25■■□□□ 1.31
HMGA2-208ENST00000537429 JUPP14923 745 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 EZRP15311 586 aaKnown RBP23.25■■□□□ 1.31
HMGA2-208ENST00000537429 SEPHS1P49903 392 aa23.25■■□□□ 1.31
HMGA2-208ENST00000537429 REEP5Q00765 189 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms