RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 AARSD1Q9BTE6 412 aaKnown RBP13.53□□□□□ -0.24
CAPN1-212ENST00000527887 SOX17Q9H6I2 414 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-212ENST00000527887 LRRC4CQ9HCJ2 640 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 C14orf105Q9NVL8 296 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 TAC3Q9UHF0 121 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 MAU2Q9Y6X3 613 aa13.53□□□□□ -0.24
CAPN1-212ENST00000527887 IGKV1-8A0A0C4DH67 115 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 KRT87PA6NCN2 255 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 TCP11X1B4DZS4 312 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 SMAPO00193 183 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 HAUS5O94927 633 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 AGFG2O95081 481 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 DDAH2O95865 285 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 HPP00738 406 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 PGAM1P18669 254 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 FBLP22087 321 aaKnown RBP13.52□□□□□ -0.25
CAPN1-212ENST00000527887 FDXRP22570 491 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 UQCRFS1P47985 274 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 FOXL2P58012 376 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 AP2B1P63010 937 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 KLC1Q07866 573 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 FAM53BQ14153 422 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 NDUFA9Q16795 377 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 CRB2Q5IJ48 1285 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 ATG9BQ674R7 924 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 KIAA0408Q6ZU52 694 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 KCNMB4Q86W47 210 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 PALM2Q8IXS6 379 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 EIF1ADQ8N9N8 165 aaKnown RBP13.52□□□□□ -0.25
CAPN1-212ENST00000527887 C2CD4AQ8NCU7 369 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-212ENST00000527887 GIMAP7Q8NHV1 300 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 CD200R1Q8TD46 325 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 MCOLN3Q8TDD5 553 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 THAP11Q96EK4 314 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 C10orf90Q96M02 699 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 CCDC138Q96M89 665 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 LMF1Q96S06 567 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 GPR21Q99679 349 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 SLC30A3Q99726 388 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 BARD1Q99728 777 aaKnown RBP13.52□□□□□ -0.25
CAPN1-212ENST00000527887 WDR77Q9BQA1 342 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-212ENST00000527887 FAM129AQ9BZQ8 928 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 TGIF2Q9GZN2 237 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 EPS8L2Q9H6S3 715 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 MKKSQ9NPJ1 570 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-212ENST00000527887 TMEM184CQ9NVA4 438 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 TAS2R13Q9NYV9 303 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 MAP10Q9P2G4 905 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 TSR3Q9UJK0 312 aaKnown RBP13.52□□□□□ -0.25
CAPN1-212ENST00000527887 C3orf18Q9UK00 162 aa13.52□□□□□ -0.25
CAPN1-212ENST00000527887 COPG1Q9Y678 874 aaKnown RBP13.52□□□□□ -0.25
CAPN1-212ENST00000527887 KCNE1BA0A087WTH5 132 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 A0A1W2PQ72 361 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 DNALI1O14645 258 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 MAP2K7O14733 419 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 SLC16A5O15375 505 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 SYF2O95926 243 aaKnown RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 C8GP07360 202 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 CYC1P08574 325 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 ANXA5P08758 320 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 ACPPP15309 386 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 CCND1P24385 295 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 CXCR2P25025 360 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 SLC26A3P40879 764 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 YBX1P67809 324 aaKnown RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 CUL1Q13616 776 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 TSTA3Q13630 321 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 CRYMQ14894 314 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 ERCC6LQ2NKX8 1250 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 THEMIS2Q5TEJ8 643 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 WDR93Q6P2C0 686 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 SYDE1Q6ZW31 735 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 UBE2R2Q712K3 238 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 MAATS1Q7Z4T9 603 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 GALNT7Q86SF2 657 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 LRRC56Q8IYG6 542 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 AGGF1Q8N302 714 aaeCLIP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 METTL27Q8N6F8 245 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 SSC4DQ8WTU2 575 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 DRC3Q9H069 523 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 AGPAT4Q9NRZ5 378 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 PCYOX1Q9UHG3 505 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 TRMT6Q9UJA5 497 aaKnown RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 RAB21Q9UL25 225 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 RUVBL1Q9Y265 456 aaKnown RBP13.51□□□□□ -0.25
CAPN1-212ENST00000527887 PCDHGA10Q9Y5H3 936 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 DOPEY2Q9Y3R5 2298 aa13.51□□□□□ -0.25
CAPN1-212ENST00000527887 BLACEA4D250 179 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 MED26O95402 600 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 CBX6O95503 412 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 ICAM2P13598 275 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 IMPA1P29218 277 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 EMP2P54851 167 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 RPS15AP62244 130 aaKnown RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 SP140Q13342 867 aa13.5□□□□□ -0.25
CAPN1-212ENST00000527887 KCTD19Q17RG1 926 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-212ENST00000527887 TEX35Q5T0J7 233 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms