RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ZNF284Q2VY69 593 aa17■□□□□ 0.31
USH1C-205ENST00000527020 ZNF658BQ4V348 819 aaPredicted RBP17■□□□□ 0.31
USH1C-205ENST00000527020 SYTL3Q4VX76 610 aa17■□□□□ 0.31
USH1C-205ENST00000527020 PRSS36Q5K4E3 855 aa17■□□□□ 0.31
USH1C-205ENST00000527020 BROXQ5VW32 411 aa17■□□□□ 0.31
USH1C-205ENST00000527020 CPZQ66K79 652 aa17■□□□□ 0.31
USH1C-205ENST00000527020 GALNT10Q86SR1 603 aa17■□□□□ 0.31
USH1C-205ENST00000527020 PGBD3Q8N328 593 aa17■□□□□ 0.31
USH1C-205ENST00000527020 ZNF555Q8NEP9 628 aa17■□□□□ 0.31
USH1C-205ENST00000527020 OR56A3Q8NH54 315 aa17■□□□□ 0.31
USH1C-205ENST00000527020 POP5Q969H6 163 aaKnown RBP17■□□□□ 0.31
USH1C-205ENST00000527020 MED8Q96G25 268 aa17■□□□□ 0.31
USH1C-205ENST00000527020 PKP4Q99569 1192 aa17■□□□□ 0.31
USH1C-205ENST00000527020 CCM2Q9BSQ5 444 aa17■□□□□ 0.31
USH1C-205ENST00000527020 FBXO10Q9UK96 956 aa17■□□□□ 0.31
USH1C-205ENST00000527020 RUVBL1Q9Y265 456 aaKnown RBP17■□□□□ 0.31
USH1C-205ENST00000527020 TCF20Q9UGU0 1960 aaKnown RBP17■□□□□ 0.31
USH1C-205ENST00000527020 EVPLLA8MZ36 301 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 KIAA0355O15063 1070 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 ABCB7O75027 752 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 ATG13O75143 517 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 LAMP1P11279 417 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 COX7A2P14406 83 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 HOXB6P17509 224 aaKnown RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 ISL1P61371 349 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 TMEM115Q12893 351 aaPredicted RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 DCTN2Q13561 401 aaKnown RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 C16orf72Q14CZ0 275 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 VMACQ2NL98 169 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 LRRC23Q53EV4 343 aaPredicted RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 PARS2Q7L3T8 475 aaKnown RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 HIPK1Q86Z02 1210 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 TMEM159Q96B96 161 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 ADNPQ9H2P0 1102 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 FAM120CQ9NX05 1096 aaKnown RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 ETAA1Q9NY74 926 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 SAMD4AQ9UPU9 718 aaKnown RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 LOC100130705A0A1B0GUX0 176 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 ZBBXA8MT70 800 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 MAGEB17A8MXT2 336 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 QSOX1O00391 747 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 SEC14L2O76054 403 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 ZNF682O95780 498 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 AGXTP21549 392 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 HNF4AP41235 474 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 RPS6KA3P51812 740 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 METAP1P53582 386 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 SKIV2LQ15477 1246 aaKnown RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 ZNF691Q5VV52 312 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 SHQ1Q6PI26 577 aaKnown RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 ZNF621Q6ZSS3 439 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 CEP68Q76N32 757 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 ARL10Q8N8L6 244 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 ATL1Q8WXF7 558 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 TBC1D20Q96BZ9 403 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 AP2M1Q96CW1 435 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 PAWRQ96IZ0 340 aaKnown RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 LRRC3BQ96PB8 259 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 DPH2Q9BQC3 489 aaPredicted RBP16.99■□□□□ 0.31
USH1C-205ENST00000527020 SGK2Q9HBY8 427 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 IL1RAPQ9NPH3 570 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 C3orf18Q9UK00 162 aa16.99■□□□□ 0.31
USH1C-205ENST00000527020 A0A1W2PPW3 197 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 SLC16A6O15403 523 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 SPINT1O43278 529 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 MITFO75030 526 aaPredicted RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 CATP04040 527 aaKnown RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 CISD3P0C7P0 127 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 EFNA1P20827 205 aaPredicted RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 ACSM2AQ08AH3 577 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 FGD3Q5JSP0 725 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 ACSM2BQ68CK6 577 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 TMEM220Q6QAJ8 160 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 CYP4Z1Q86W10 505 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 SPARTQ8N0X7 666 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 CDC26Q8NHZ8 85 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 SNX19Q92543 992 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 SAMD11Q96NU1 681 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 GABARAPL1Q9H0R8 117 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 BRF2Q9HAW0 419 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 SCAMP2O15127 329 aaKnown RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 SH3BGRLO75368 114 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 EPN2O95208 641 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 CPSF4O95639 269 aaKnown RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 SOD1P00441 154 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 ELFN1P0C7U0 828 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 HSD3B1P14060 373 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 CD247P20963 164 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 XPAP23025 273 aaPredicted RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 HSD3B2P26439 372 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 PBLDP30039 288 aaPredicted RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 NNMTP40261 264 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 E2F2Q14209 437 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 LAPTM4AQ15012 233 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 ACOX1Q15067 660 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 ZC3H12BQ5HYM0 836 aaKnown RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 XKR5Q6UX68 686 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 NLRP8Q86W28 1048 aa16.98■□□□□ 0.31
USH1C-205ENST00000527020 C1orf52Q8N6N3 182 aaKnown RBP16.98■□□□□ 0.31
USH1C-205ENST00000527020 TERB1Q8NA31 727 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms