RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZFAND4Q86XD8 727 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 OR4K1Q8NGD4 311 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
SMPD1-202ENST00000526280 UBTD2Q8WUN7 234 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 SLC5A11Q8WWX8 675 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 N4BP2L2Q92802 583 aaPredicted RBP12.39□□□□□ -0.43
SMPD1-202ENST00000526280 NEIL2Q969S2 332 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 ESAMQ96AP7 390 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 ZNF285Q96NJ3 590 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 CD244Q9BZW8 370 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 MRPL46Q9H2W6 279 aaKnown RBP12.39□□□□□ -0.43
SMPD1-202ENST00000526280 ENAMQ9NRM1 1142 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 TMEM216Q9P0N5 145 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 XPR1Q9UBH6 696 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 TMEM184BQ9Y519 407 aaPredicted RBP12.39□□□□□ -0.43
SMPD1-202ENST00000526280 KCNE2Q9Y6J6 123 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 SEC16AO15027 2179 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 SDK2Q58EX2 2172 aa12.39□□□□□ -0.43
SMPD1-202ENST00000526280 URB1O60287 2271 aaKnown RBP12.39□□□□□ -0.43
SMPD1-202ENST00000526280 A0A0J9YVX5 310 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 STMND1H3BQB6 276 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 TK2O00142 265 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 TAF4O00268 1085 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 HAT1O14929 419 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 SRPX2O60687 465 aaPredicted RBP12.38□□□□□ -0.43
SMPD1-202ENST00000526280 OR2B3O76000 313 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 STK17BO94768 372 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 SBK3P0C264 359 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 GFAPP14136 432 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ZNF28P17035 718 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 KRT4P19013 534 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 AGTR2P50052 363 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 CCR8P51685 355 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ALDH18A1P54886 795 aaKnown RBP12.38□□□□□ -0.43
SMPD1-202ENST00000526280 PCBP4P57723 403 aaKnown RBP12.38□□□□□ -0.43
SMPD1-202ENST00000526280 SLC18A2Q05940 514 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 SETDB1Q15047 1291 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 PFKFB4Q16877 469 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 CATSPEREQ5SY80 951 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 PRAMEF17Q5VTA0 474 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ADCK2Q7Z695 626 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 TRABD2AQ86V40 505 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 DTX1Q86Y01 620 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 TMEM126BQ8IUX1 230 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ZCCHC14Q8WYQ9 949 aaKnown RBP12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ZBTB9Q96C00 473 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ZIM3Q96PE6 472 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ZFYVE21Q9BQ24 234 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ULBP3Q9BZM4 244 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 SPRTNQ9H040 489 aaPredicted RBP12.38□□□□□ -0.43
SMPD1-202ENST00000526280 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 CPSF2Q9P2I0 782 aaKnown RBP12.38□□□□□ -0.43
SMPD1-202ENST00000526280 TMCO1Q9UM00 188 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 DYRK1BQ9Y463 629 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 ASB1Q9Y576 335 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 PCDHB3Q9Y5E6 796 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 MDC1Q14676 2089 aaKnown RBP12.38□□□□□ -0.43
SMPD1-202ENST00000526280 USP24Q9UPU5 2620 aa12.38□□□□□ -0.43
SMPD1-202ENST00000526280 KCNE1BA0A087WTH5 132 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 LOC105369274A0A096LPK9 316 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 LOC102723532A0A0G2JNH3 316 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 E7EQ34 232 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 H0YGG7 62 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 AGPSO00116 658 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 CCNT2O60583 730 aaKnown RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 SCRG1O75711 98 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 KIAA0754O94854 1291 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 DLGAP3O95886 979 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 GNAZP19086 355 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 CRHR1P34998 444 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 CCT5P48643 541 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 ARF3P61204 181 aaPredicted RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 CDC16Q13042 620 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 PCBP2Q15366 365 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 KRT71Q3SY84 523 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 TCTE1Q5JU00 501 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 FRMPD2BQ6IN97 320 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 C16orf46Q6P387 395 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 TLDC1Q6P9B6 456 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 NXPE4Q6UWF7 544 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 LRIG3Q6UXM1 1119 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 ZNF771Q7L3S4 317 aaPredicted RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 LRRC70Q7Z2Q7 622 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 TIPARPQ7Z3E1 657 aaKnown RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 PLD3Q8IV08 490 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 GPR135Q8IZ08 494 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 OR4N4Q8N0Y3 316 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 ZNF248Q8NDW4 579 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 OR2A5Q96R48 311 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 SELENOSQ9BQE4 189 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 SARGQ9BW04 601 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 CAPS2Q9BXY5 557 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 SYNPO2LQ9H987 977 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 GPRC5BQ9NZH0 403 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 TNPO3Q9Y5L0 923 aaKnown RBP12.37□□□□□ -0.43
SMPD1-202ENST00000526280 AP1M2Q9Y6Q5 423 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 FITM1A5D6W6 292 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 K7EPI3 171 aa12.37□□□□□ -0.43
SMPD1-202ENST00000526280 ZSCAN9O15535 394 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms