RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CDRT15L2A8MXV6 281 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TARM1B6A8C7 271 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 C4orf51C9J302 202 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 G3V2L1 256 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TMX2-CTNND1H3BSU7 103 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 AGPSO00116 658 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MASP2O00187 686 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SAP18O00422 153 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TOX3O15405 576 aaPredicted RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 KLK10O43240 276 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MAP3K7O43318 606 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 RAD1O60671 282 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SMIM24O75264 130 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 GLRA3O75311 464 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SASH3O75995 380 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 OR2B3O76000 313 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PROCP04070 461 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 CAPNS1P04632 268 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 RBP1P09455 135 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 C1GALT1C1LP0DN25 315 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PCNAP12004 261 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 H2AFXP16104 143 aaPredicted RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 IL1RNP18510 177 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 F8A1P23610 371 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 HSD17B2P37059 387 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 OR1D4P47884 311 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC6A12P48065 614 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP1A2P50993 1020 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 NEK2P51955 445 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ITGA1P56199 1179 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MAT1AQ00266 395 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 CDKL1Q00532 357 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ACY1Q03154 408 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 CDC16Q13042 620 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 GPS2Q13227 327 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 CHIT1Q13231 466 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 CLN3Q13286 438 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 DDX39BQ13838 428 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MPP2Q14168 576 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 DOC2AQ14183 400 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SETDB1Q15047 1291 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 RBBP7Q16576 425 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PDK4Q16654 411 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 CLPPQ16740 277 aaPredicted RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SYT16Q17RD7 645 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TSNAXIP1Q2TAA8 658 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TBC1D25Q3MII6 688 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SGO1Q5FBB7 561 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 XKR6Q5GH73 641 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TCHHL1Q5QJ38 904 aaPredicted RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ATP1A1-AS1Q5TC04 95 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SULT1C3Q6IMI6 304 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF425Q6IV72 752 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SCIMPQ6UWF3 145 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 NXPE4Q6UWF7 544 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SLCO4C1Q6ZQN7 724 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 RIPOR1Q6ZS17 1223 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ZCCHC23Q6ZST2 131 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TTLL10Q6ZVT0 673 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 RNF44Q7L0R7 432 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 GOLGA7Q7Z5G4 137 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 VN1R4Q7Z5H5 301 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 EXOC3L1Q86VI1 746 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 KMT5CQ86Y97 462 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 C10orf107Q8IVU9 208 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PRSS58Q8IYP2 241 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 CSNK1A1LQ8N752 337 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 BANPQ8N9N5 519 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 KCT2Q8NC54 265 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PDPRQ8NCN5 879 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 OR52B6Q8NGF0 335 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MGARPQ8TDB4 240 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TCP10LQ8TDR4 215 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TRPC4APQ8TEL6 797 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 HNRNPLLQ8WVV9 542 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC5A11Q8WWX8 675 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ATL1Q8WXF7 558 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ANKRD7Q92527 254 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MR1Q95460 341 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ARL8AQ96BM9 186 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 APOPT1Q96IL0 206 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PKNOX2Q96KN3 472 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM111AQ96PZ2 611 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM237Q96Q45 408 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 OR2A5Q96R48 311 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 HBEGFQ99075 208 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PAIP2Q9BPZ3 127 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ZFYVE21Q9BQ24 234 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MRPL57Q9BQC6 102 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MESP1Q9BRJ9 268 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 YIPF2Q9BWQ6 316 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 RBCK1Q9BYM8 510 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ROPN1BQ9BZX4 212 aaPredicted RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 MRPL46Q9H2W6 279 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 KLHL31Q9H511 634 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 NOL11Q9H8H0 719 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 IPPKQ9H8X2 491 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ROPN1Q9HAT0 212 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms