RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RBCK1Q9BYM8 510 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 SYNPO2LQ9H987 977 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 KCNJ16Q9NPI9 418 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 MKKSQ9NPJ1 570 aaPredicted RBP11□□□□□ -0.65
SDCBP-211ENST00000523441 RNF6Q9Y252 685 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 PLEKHA6Q9Y2H5 1048 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 R3HDM2Q9Y2K5 976 aaKnown RBP11□□□□□ -0.65
SDCBP-211ENST00000523441 ASB1Q9Y576 335 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 A0A1B0GTH9 108 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 FOXO6A8MYZ6 492 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 TARM1B6A8C7 271 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 APOA4P06727 396 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 SP1P08047 785 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 EIF3EP60228 445 aaKnown RBP10.99□□□□□ -0.65
SDCBP-211ENST00000523441 PLOD1Q02809 727 aaPredicted RBP10.99□□□□□ -0.65
SDCBP-211ENST00000523441 ITIH4Q14624 930 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 MEP1AQ16819 746 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 SLC25A25Q6KCM7 469 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 FBXO42Q6P3S6 717 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 RNF44Q7L0R7 432 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 CPEB2Q7Z5Q1 589 aaKnown RBP10.99□□□□□ -0.65
SDCBP-211ENST00000523441 PLD3Q8IV08 490 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 CDKL3Q8IVW4 592 aaPredicted RBP10.99□□□□□ -0.65
SDCBP-211ENST00000523441 SIAH3Q8IW03 269 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 RAB42Q8N4Z0 105 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 ACTL9Q8TC94 416 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 STYXQ8WUJ0 223 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 LRRC45Q96CN5 670 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 NPAS2Q99743 824 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
SDCBP-211ENST00000523441 POLDIP3Q9BY77 421 aaKnown RBP10.99□□□□□ -0.65
SDCBP-211ENST00000523441 VN1R1Q9GZP7 353 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 CDCP1Q9H5V8 836 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 HCN3Q9P1Z3 774 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 LRFN1Q9P244 771 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 GNPTGQ9UJJ9 305 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 HEATR5BQ9P2D3 2071 aa10.99□□□□□ -0.65
SDCBP-211ENST00000523441 ABCA4P78363 2273 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 LOC102723996A0A087X1L8 192 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 H7C0S8 307 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 TFECO14948 347 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 P2RX6O15547 441 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 VPS26AO75436 327 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 CDC123O75794 336 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 FAM155BO75949 473 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 ZRANB2O95218 330 aaKnown RBP eCLIP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 CMPK1P30085 196 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 FOXN2P32314 431 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 PTGS2P35354 604 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 SLC26A3P40879 764 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 SLC1A1P43005 524 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 SNRPNP63162 240 aaKnown RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 FOLH1Q04609 750 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 ACTN3Q08043 901 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 PMPCAQ10713 525 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 TMED2Q15363 201 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 ZNF468Q5VIY5 522 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 TMEM205Q6UW68 189 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 UNC5DQ6UXZ4 953 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 PACS1Q6VY07 963 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 CHERPQ8IWX8 916 aaKnown RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 RHOT2Q8IXI1 618 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 DMRTC2Q8IXT2 367 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 ZZZ3Q8IYH5 903 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 EID3Q8N140 333 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 ACBD4Q8NC06 268 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 OR10Q1Q8NGQ4 319 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 OR2A1Q8NGT9 310 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 OR9A4Q8NGU2 314 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 OR6P1Q8NGX9 317 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 ASZ1Q8WWH4 475 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 HDAC10Q969S8 669 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 RERGQ96A58 199 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 RAD51AP1Q96B01 352 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 FAM136AQ96C01 138 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 SCMH1Q96GD3 660 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 CYTH2Q99418 400 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 FOXC2Q99958 501 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 TREX2Q9BQ50 279 aaPredicted RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 DRC3Q9H069 523 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 MRPS30Q9NP92 439 aaKnown RBP10.98□□□□□ -0.65
SDCBP-211ENST00000523441 SLC2A6Q9UGQ3 507 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 PCYOX1Q9UHG3 505 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 HRH3Q9Y5N1 445 aa10.98□□□□□ -0.65
SDCBP-211ENST00000523441 ASPDHA6ND91 283 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 USP27XA6NNY8 438 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 NDC80O14777 642 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 PSTPIP1O43586 416 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 FOXS1O43638 330 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 HS6ST1O60243 411 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 SLC25A12O75746 678 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 TOXO94900 526 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 SUN1O94901 812 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 C1orf105O95561 183 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 GOT2P00505 430 aaKnown RBP10.97□□□□□ -0.65
SDCBP-211ENST00000523441 RBP3P10745 1247 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 MSX1P28360 303 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 RPA3P35244 121 aaPredicted RBP10.97□□□□□ -0.65
SDCBP-211ENST00000523441 AVPR1BP47901 424 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 DGKQP52824 942 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms