RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ADAMTS18Q8TE60 1221 aa21.55■■□□□ 1.04
PVT1-218ENST00000523328 OR2A5Q96R48 311 aa21.55■■□□□ 1.04
PVT1-218ENST00000523328 TUBB6Q9BUF5 446 aa21.55■■□□□ 1.04
PVT1-218ENST00000523328 REXO2Q9Y3B8 237 aaKnown RBP21.55■■□□□ 1.04
PVT1-218ENST00000523328 EPN1Q9Y6I3 576 aaPredicted RBP21.55■■□□□ 1.04
PVT1-218ENST00000523328 CD3EAPO15446 510 aaKnown RBP21.54■■□□□ 1.04
PVT1-218ENST00000523328 PHF2O75151 1096 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 VPS26AO75436 327 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 MATN4O95460 622 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 MYBL2P10244 700 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 RPS3P23396 243 aaKnown RBP eCLIP21.54■■□□□ 1.04
PVT1-218ENST00000523328 FDFT1P37268 417 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 CASP6P55212 293 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 TESK1Q15569 626 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 GARNL3Q5VVW2 1013 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 SUSD1Q6UWL2 747 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 ATG4AQ8WYN0 398 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 FOPNLQ96NB1 174 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 MRPS30Q9NP92 439 aaKnown RBP21.54■■□□□ 1.04
PVT1-218ENST00000523328 CHRAC1Q9NRG0 131 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 MKL2Q9ULH7 1088 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 PACSIN2Q9UNF0 486 aaPredicted RBP21.54■■□□□ 1.04
PVT1-218ENST00000523328 ZNF835Q9Y2P0 537 aa21.54■■□□□ 1.04
PVT1-218ENST00000523328 MTORP42345 2549 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 A0A0A6YYC8 382 aaPredicted RBP21.53■■□□□ 1.04
PVT1-218ENST00000523328 SOWAHDA6NJG2 315 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 I3L1I5 382 aaPredicted RBP21.53■■□□□ 1.04
PVT1-218ENST00000523328 ANXA5P08758 320 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 SSTR2P30874 369 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 STIP1P31948 543 aaKnown RBP21.53■■□□□ 1.04
PVT1-218ENST00000523328 KRTAP10-9P60411 292 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 GBX1Q14549 363 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 LONRF1Q17RB8 773 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 ZNF766Q5HY98 468 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.53■■□□□ 1.04
PVT1-218ENST00000523328 CTSL3PQ5NE16 218 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 ZNF425Q6IV72 752 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 LRRC6Q86X45 466 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 RNF214Q8ND24 703 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 DRC3Q9H069 523 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 TEKT2Q9UIF3 430 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 AMFRQ9UKV5 643 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 PCDHGB6Q9Y5F9 930 aa21.53■■□□□ 1.04
PVT1-218ENST00000523328 C8orf89P0DMQ9 161 aa21.52■■□□□ 1.04
PVT1-218ENST00000523328 ESRRAP11474 423 aaPredicted RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 KIR3DL1P43629 444 aa21.52■■□□□ 1.04
PVT1-218ENST00000523328 SMSP52788 366 aa21.52■■□□□ 1.04
PVT1-218ENST00000523328 SNRPNP63162 240 aaKnown RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 MAT1AQ00266 395 aaKnown RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 OASLQ15646 514 aaKnown RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 Q6ZPB1 254 aaPredicted RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 PPHLN1Q8NEY8 458 aaKnown RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 OR9A1PQ8NGU1 263 aa21.52■■□□□ 1.04
PVT1-218ENST00000523328 THAP3Q8WTV1 239 aaPredicted RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 SMPDL3AQ92484 453 aa21.52■■□□□ 1.04
PVT1-218ENST00000523328 MTFMTQ96DP5 389 aaKnown RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 TREX1Q9NSU2 369 aa21.52■■□□□ 1.04
PVT1-218ENST00000523328 TSR3Q9UJK0 312 aaKnown RBP21.52■■□□□ 1.04
PVT1-218ENST00000523328 IGHV3-20A0A0C4DH32 117 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 ARHGEF33A8MVX0 844 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 E7EVH7 732 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 P2RX6O15547 441 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 CLDN14O95500 239 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 EIF3BP55884 814 aaKnown RBP21.51■■□□□ 1.03
PVT1-218ENST00000523328 H3F3CQ6NXT2 135 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 PEX26Q7Z412 305 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 PRUNE1Q86TP1 453 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 MPP5Q8N3R9 675 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 UBL4BQ8N7F7 174 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 GPR137Q96N19 417 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 BIRC8Q96P09 236 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 VN1R1Q9GZP7 353 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 TAC3Q9UHF0 121 aa21.51■■□□□ 1.03
PVT1-218ENST00000523328 A8MUI8 341 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 MYO1CO00159 1063 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 NDUFS3O75489 264 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 SEC24DO94855 1032 aaPredicted RBP21.5■■□□□ 1.03
PVT1-218ENST00000523328 IFNB1P01574 187 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 EZRP15311 586 aaKnown RBP21.5■■□□□ 1.03
PVT1-218ENST00000523328 ATP5DP30049 168 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 RPA3P35244 121 aaPredicted RBP21.5■■□□□ 1.03
PVT1-218ENST00000523328 PRDX1Q06830 199 aaKnown RBP21.5■■□□□ 1.03
PVT1-218ENST00000523328 FAM53BQ14153 422 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 ANKRD20A4Q4UJ75 823 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 PCID2Q5JVF3 399 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 ICE2Q659A1 982 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 FCRLBQ6BAA4 426 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 PLAG1Q6DJT9 500 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 LANCL3Q6ZV70 420 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 SPPL2CQ8IUH8 684 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 SHISA5Q8N114 240 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 BEST3Q8N1M1 668 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 MDS2Q8NDY4 140 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 C14orf79Q96F83 325 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 MAGED4Q96JG8 741 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 SIGLEC12Q96PQ1 595 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 RAB6BQ9NRW1 208 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 MEMO1Q9Y316 297 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 SCN3AQ9NY46 2000 aa21.5■■□□□ 1.03
PVT1-218ENST00000523328 MIF4GDA9UHW6 222 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms