RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CCDC71Q8IV32 467 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-216ENST00000523088 MISPQ8IVT2 679 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 DDIASQ8IXT1 998 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 CDK20Q8IZL9 346 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 RASGEF1CQ8N431 466 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 SPATA6LQ8N4H0 392 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF561Q8N587 486 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF511Q8NB15 262 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 KDM1BQ8NB78 822 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 POGLUT1Q8NBL1 392 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 PAPD5Q8NDF8 572 aaKnown RBP7.32□□□□□ -1.24
HDAC3-216ENST00000523088 FAM13CQ8NE31 585 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 C17orf47Q8NEP4 570 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 OR2D3Q8NGH3 330 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 OR52H1Q8NGJ2 320 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 OR2L8Q8NGY9 312 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 TAS1R2Q8TE23 839 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 AUTS2Q8WXX7 1259 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 RIN2Q8WYP3 895 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-216ENST00000523088 HTRA1Q92743 480 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 ATOH1Q92858 354 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-216ENST00000523088 FBXO32Q969P5 355 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 FUBP1Q96AE4 644 aaKnown RBP7.32□□□□□ -1.24
HDAC3-216ENST00000523088 R3HDM4Q96D70 268 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 ZFP42Q96MM3 310 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 FOXN4Q96NZ1 517 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF317Q96PQ6 595 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-216ENST00000523088 APOL2Q9BQE5 337 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 TUBB6Q9BUF5 446 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 APOL6Q9BWW8 343 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 GTPBP2Q9BX10 602 aaKnown RBP7.32□□□□□ -1.24
HDAC3-216ENST00000523088 CCDC90BQ9GZT6 254 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 TOLLIPQ9H0E2 274 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 PDZD7Q9H5P4 517 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 OPA3Q9H6K4 179 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 ARMC7Q9H6L4 198 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF696Q9H7X3 374 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 GPRC5CQ9NQ84 441 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 MAN2C1Q9NTJ4 1040 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 MARCH5Q9NX47 278 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 MAT2BQ9NZL9 334 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 PPP4R1LQ9P1A2 415 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 RPH3ALQ9UNE2 315 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 TP53TG5Q9Y2B4 290 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 PRG3Q9Y2Y8 225 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-216ENST00000523088 NDUFAF1Q9Y375 327 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 ACTL7AQ9Y615 435 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 VWA8A3KMH1 1905 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 TRIOO75962 3097 aa7.32□□□□□ -1.24
HDAC3-216ENST00000523088 TEX13CA0A0J9YWL9 993 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 EIF4E1BA6NMX2 242 aaKnown RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 E7ESA3 106 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 CDC7O00311 574 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 B4GALT5O43286 388 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PRKYO43930 277 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MFAP3LO75121 409 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MTX2O75431 263 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 UNC5CO95185 931 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 ATE1O95260 518 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 EFEMP2O95967 443 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 IL1BP01584 269 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PROCP04070 461 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 ERBB2P04626 1255 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 HNRNPA1P09651 372 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 EPCAMP16422 314 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 XRCC1P18887 633 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 DDCP20711 480 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 CCNOP22674 350 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 DNASE1P24855 282 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 GJB2P29033 226 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PRDX6P30041 224 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PPP2R1BP30154 601 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MC3RP41968 323 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MAGEA2P43356 314 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 ARSEP51690 589 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 ATP5IP56385 69 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 ARF6P62330 175 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PSPHP78330 225 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 IRX4P78413 519 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PMP22Q01453 160 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 SOX4Q06945 474 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PUDPQ08623 228 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 DBPQ10586 325 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 KCNH2Q12809 1159 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 TRA2AQ13595 282 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 KRT81Q14533 505 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 SYT16Q17RD7 645 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 HNRNPA1L2Q32P51 320 aaKnown RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 RNF212Q495C1 297 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 TOR2AQ5JU69 321 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PPM1LQ5SGD2 360 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 PIP5KL1Q5T9C9 394 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MANEALQ5VSG8 457 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 YOD1Q5VVQ6 348 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-216ENST00000523088 HACD4Q5VWC8 232 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 LRRC66Q68CR7 880 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 BRAT1Q6PJG6 821 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 HFE2Q6ZVN8 426 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 MAEAQ7L5Y9 396 aa7.31□□□□□ -1.24
HDAC3-216ENST00000523088 ZDHHC13Q8IUH4 622 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms