RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ICE2Q659A1 982 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 UBE2R2Q712K3 238 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 PIWIL4Q7Z3Z4 852 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 CUZD1Q86UP6 607 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 CPNE9Q8IYJ1 553 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 RASGEF1CQ8N431 466 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 MCUQ8NE86 351 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 OR11G2Q8NGC1 345 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 SSC4DQ8WTU2 575 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 ZNF480Q8WV37 535 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 ASB11Q8WXH4 323 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 MMABQ96EY8 250 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 VPS50Q96JG6 964 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 ZNF285Q96NJ3 590 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 PRAP1Q96NZ9 151 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 NDNQ99608 321 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 LHPPQ9H008 270 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 SLC26A1Q9H2B4 701 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 SEMA3GQ9NS98 782 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 UTP6Q9NYH9 597 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 PCYOX1Q9UHG3 505 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 NXT1Q9UKK6 140 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 FBXO5Q9UKT4 447 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 CDC14AQ9UNH5 594 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 CSAG2Q9Y5P2 127 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 ANKRD12Q6UB98 2062 aa9.76□□□□□ -0.85
CTNNA1-235ENST00000522730 A0A0A6YYC8 382 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 GOLGA6L10A0A0M3HER8 536 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 ZCWPW2A0A1B0GU75 182 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 OR2A25A4D2G3 310 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 VSTM2BA6NLU5 285 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 ZNF839A8K0R7 811 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 I3L1I5 382 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 MAP2K7O14733 419 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 BANF1O75531 89 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CCNDBP1O95273 360 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 ONECUT2O95948 504 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 ACPPP15309 386 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CXCR2P25025 360 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CARSP49589 748 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 SOX8P57073 446 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 EEF1A2Q05639 463 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 Q0VFX4 171 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CDC16Q13042 620 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 ARHGAP19Q14CB8 494 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 NAA25Q14CX7 972 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 SYT16Q17RD7 645 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 MFSD4BQ5TF39 518 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 PRMT9Q6P2P2 845 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 IGFL3Q6UXB1 125 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CYHR1Q6ZMK1 362 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 RNF44Q7L0R7 432 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 PAQR7Q86WK9 346 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CREG2Q8IUH2 290 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 PALM2Q8IXS6 379 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 PPIL6Q8IXY8 311 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 AGGF1Q8N302 714 aaeCLIP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 AMER2Q8N7J2 671 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 ZNF454Q8N9F8 522 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CATSPER1Q8NEC5 780 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 GIMAP7Q8NHV1 300 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CALML6Q8TD86 181 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 GRK7Q8WTQ7 553 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CAPZA3Q96KX2 299 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 SIGLEC10Q96LC7 697 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 C10orf90Q96M02 699 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 MACROD1Q9BQ69 325 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 SYNPO2LQ9H987 977 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 PPANQ9NQ55 473 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 CUEDC1Q9NWM3 386 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 PTGFRNQ9P2B2 879 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 PLEKHB1Q9UF11 243 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 ASIC3Q9UHC3 531 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 TRMT6Q9UJA5 497 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 RUVBL1Q9Y265 456 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 NTNG1Q9Y2I2 539 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 DHRS7Q9Y394 339 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 KLK4Q9Y5K2 254 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 ICE1Q9Y2F5 2266 aa9.75□□□□□ -0.85
CTNNA1-235ENST00000522730 NSG1A0A0A6YYJ2 146 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 IGKV1-8A0A0C4DH67 115 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 ANKUB1A6NFN9 424 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 E7ENX8 843 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 HAT1O14929 419 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 PHF2O75151 1096 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 KLHL18O94889 574 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 F10P00742 488 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 RNF224P0DH78 156 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 MPC1LP0DKB6 136 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 MAT1AQ00266 395 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 TAP2Q03519 686 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 PTK6Q13882 451 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 PRTGQ2VWP7 1150 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 BBS9Q3SYG4 887 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 ISLR2Q6UXK2 745 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 Q6ZS92 163 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 NEK10Q6ZWH5 1172 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 KCNMB4Q86W47 210 aa9.74□□□□□ -0.85
CTNNA1-235ENST00000522730 KBTBD2Q8IY47 623 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms