RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 LACRTQ9GZZ8 138 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 SYNPO2LQ9H987 977 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 KCNK13Q9HB14 408 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 EML4Q9HC35 981 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 ZNF304Q9HCX3 659 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 GALNT8Q9NY28 637 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 FAM8A1Q9UBU6 413 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 ZNF282Q9UDV7 671 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 ICKQ9UPZ9 632 aa6.29□□□□□ -1.4
CTNNA1-216ENST00000519489 OR14I1A6ND48 311 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 DFFAO00273 331 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 FOXN3O00409 490 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 UBFD1O14562 309 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 WDR1O75083 606 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 CCDC166P0CW27 439 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 ICAM2P13598 275 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 IDUAP35475 653 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 PPIAP62937 165 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 FANCCQ00597 558 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 OCA2Q04671 838 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 PRKG2Q13237 762 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 SQLEQ14534 574 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 SLC39A14Q15043 492 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 TAZQ16635 292 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 ATP13A5Q4VNC0 1218 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 CCDC38Q502W7 563 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 FAM182AQ5T1J6 154 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 TMEM220Q6QAJ8 160 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 Q6ZPA2 131 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 AMIGO1Q86WK6 493 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 ZC3H7AQ8IWR0 971 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 RAVER1Q8IY67 606 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 ARMC10Q8N2F6 343 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 TRAM1L1Q8N609 369 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 AMER3Q8N944 861 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 CREB3L4Q8TEY5 395 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 NTAN1Q96AB6 310 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 C10orf90Q96M02 699 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 USP28Q96RU2 1077 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 TFB2MQ9H5Q4 396 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 EXOC1Q9NV70 894 aa6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 ZNF629Q9UEG4 869 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-216ENST00000519489 CADP27708 2225 aa6.27□□□□□ -1.4
CTNNA1-216ENST00000519489 A0A0J9YY10 115 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ARHGAP42A6NI28 874 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 OR2AG2A6NM03 316 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ARHGEF33A8MVX0 844 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 EEF1E1-BLOC1S5C9J1V9 151 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 H3BQV1 296 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 POLR2DO15514 142 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 EEF1E1O43324 174 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 SGTAO43765 313 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 GLSO94925 669 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 POLBP06746 335 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 HEXBP07686 556 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 VCLP18206 1134 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 MAGP20916 626 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 EPHA1P21709 976 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ZFP36P26651 326 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 TRHRP34981 398 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 CDKN1AP38936 164 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 HLCSP50747 726 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 RENBPP51606 427 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 LOXL1Q08397 574 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 CA9Q16790 459 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 CYB5R2Q6BCY4 276 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 UNC5AQ6ZN44 842 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 BRAPQ7Z569 592 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ZDHHC17Q8IUH5 632 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 IQUBQ8NA54 791 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 FAM46AQ96IP4 442 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ART5Q96L15 291 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 RBM24Q9BX46 236 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 CXorf56Q9H5V9 222 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ASB8Q9H765 288 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 SYNCQ9H7C4 482 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 METTL5Q9NRN9 209 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 KLHL28Q9NXS3 571 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 PKD2L2Q9NZM6 624 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ACAD8Q9UKU7 415 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 ALPK2Q86TB3 2170 aa6.27□□□□□ -1.41
CTNNA1-216ENST00000519489 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 YLPM1P49750 1951 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 LOC105369274A0A096LPK9 316 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 LOC102723532A0A0G2JNH3 316 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 FEZF1A0PJY2 475 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 FAM234BA2RU67 622 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 RGSL1A5PLK6 1076 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 C2CD4BA6NLJ0 364 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 H3BRJ5 948 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 AQP7O14520 342 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 CASKO14936 926 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 OR10H2O60403 315 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 UGT1A9O60656 530 aa6.26□□□□□ -1.41
CTNNA1-216ENST00000519489 CTSVO60911 334 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms