RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NRP2O60462 931 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CTSVO60911 334 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 SEC24DO94855 1032 aaPredicted RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 F12P00748 615 aaPredicted RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 CD46P15529 392 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 KDELR1P24390 212 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 SHMT2P34897 504 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CTNNA1P35221 906 aaKnown RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 RFC3P40938 356 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CHRNA4P43681 627 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CD151P48509 253 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 VSX2P58304 361 aaPredicted RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 IFI35P80217 286 aaPredicted RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 ITGA9Q13797 1035 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CMPK2Q5EBM0 449 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 WASHC2DQ5SRD0 308 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 LRRC38Q5VT99 294 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 FRMPD2BQ6IN97 320 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 SLC25A25Q6KCM7 469 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 HMBOX1Q6NT76 420 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TMEM205Q6UW68 189 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 ZNF227Q86WZ6 799 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 SYCE1Q8N0S2 351 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TTC29Q8NA56 475 aaPredicted RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 TMEM178AQ8NBL3 297 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TRIM58Q8NG06 486 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 ZNF398Q8TD17 642 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 DENND1AQ8TEH3 1009 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 C10orf90Q96M02 699 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 Q96MF0 132 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 SELENOSQ9BQE4 189 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 UTP23Q9BRU9 249 aaKnown RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 TP63Q9H3D4 680 aaPredicted RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 BEX4Q9NWD9 120 aaPredicted RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 UBP1Q9NZI7 540 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TEKT2Q9UIF3 430 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 LOC105369274A0A096LPK9 316 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 LOC102723532A0A0G2JNH3 316 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 A0A0G2JNJ9 132 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 A0A1W2PPR1 153 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 RASGRF2O14827 1237 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CTIFO43310 598 aaKnown RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 PSTPIP1O43586 416 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 KIF5CO60282 957 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CDC40O60508 579 aaKnown RBP eCLIP8.61□□□□□ -1.03
NUP54-211ENST00000512151 HEXBP07686 556 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TFEBP19484 476 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 FBLP22087 321 aaKnown RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 GNG11P61952 73 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CBLBQ13191 982 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 DPYSL3Q14195 570 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 KRT81Q14533 505 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 KIR2DS3Q14952 304 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TAZQ16635 292 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 MAPKAPK3Q16644 382 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 FIGLAQ6QHK4 219 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 MFSD7Q6UXD7 560 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 LANCL3Q6ZV70 420 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 KATNAL2Q8IYT4 538 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 OR4N4Q8N0Y3 316 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 SLC25A41Q8N5S1 370 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 C2orf73Q8N5S3 287 aaPredicted RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 PQLC3Q8N755 202 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 AMER3Q8N944 861 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 LINC01555Q8NAE3 123 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 CCNYQ8ND76 341 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TMEM125Q96AQ2 219 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 ZNF354BQ96LW1 612 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 ALS2CR12Q96Q35 445 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 OLFM1Q99784 485 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TUBB6Q9BUF5 446 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 SLC25A51Q9H1U9 297 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 HAUS2Q9NVX0 235 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 OR6C2Q9NZP2 312 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TRPC4Q9UBN4 977 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 Q9UFV3 132 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TDRKHQ9Y2W6 561 aaKnown RBP8.61□□□□□ -1.03
NUP54-211ENST00000512151 GABRR3A8MPY1 467 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 NME2P1O60361 137 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 PDE9AO76083 593 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 KRT1P04264 644 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 ICAM2P13598 275 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 NME2P22392 152 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 ACADLP28330 430 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 ADH7P40394 386 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
NUP54-211ENST00000512151 KRTAP1-1Q07627 177 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 DAZAP2Q15038 168 aaPredicted RBP8.6□□□□□ -1.03
NUP54-211ENST00000512151 SYT16Q17RD7 645 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 BTBD16Q32M84 506 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 FAM214AQ32MH5 1076 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 FLYWCH1Q4VC44 716 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 TCTE1Q5JU00 501 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 SIRPB2Q5JXA9 342 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 ZDHHC20Q5W0Z9 365 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 PRMT9Q6P2P2 845 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 UNC5DQ6UXZ4 953 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 SYT10Q6XYQ8 523 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 ACAD11Q709F0 780 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 ZC3H7AQ8IWR0 971 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms