RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 KXD1Q9BQD3 176 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ZSCAN5AQ9BUG6 496 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 KCNH6Q9H252 994 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 CLMPQ9H6B4 373 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 LRTM1Q9HBL6 345 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ZFP14Q9HCL3 533 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 DZANK1Q9NVP4 752 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 WWOXQ9NZC7 414 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 VAPAQ9P0L0 249 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 USP22Q9UPT9 525 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 INVSQ9Y283 1065 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 MAN2B2Q9Y2E5 1009 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 NAALAD2Q9Y3Q0 740 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 V9GYQ6 96 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 LOC100130705A0A1B0GUX0 176 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 TBC1D3BA6NDS4 549 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 CFAP99D6REC4 459 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 K7EPI3 171 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 M0QX08 132 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 EIF3FO00303 357 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 DFNA5O60443 496 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 UGT2B11O75310 529 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ZBTB11O95625 1053 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 MT-ND1P03886 318 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 PRNPP04156 253 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 OCM2P0CE71 109 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 OCMP0CE72 109 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 CBSLP0DN79 551 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ITGAMP11215 1152 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 FOSL2P15408 326 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 EPB42P16452 691 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 MAPK1P28482 360 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 SHMT2P34897 504 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 CBSP35520 551 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 POLR2IP36954 125 aaKnown RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 OPRD1P41143 372 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 YAP1P46937 504 aaKnown RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ARHGDIAP52565 204 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 RPL38P63173 70 aaKnown RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 FCHO2Q0JRZ9 810 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 HYAL1Q12794 435 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 BNIP3Q12983 259 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ELAVL3Q14576 367 aaKnown RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF846Q147U1 533 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ZXDCQ2QGD7 858 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF284Q2VY69 593 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC44A4Q53GD3 710 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 LRIF1Q5T3J3 769 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 DUS1LQ6P1R4 473 aaKnown RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 DCDC5Q6ZRR9 648 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 CACUL1Q86Y37 369 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ANKRD13BQ86YJ7 626 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 TMEM132CQ8N3T6 1108 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 TRAM1L1Q8N609 369 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 S100ZQ8WXG8 99 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 MUL1Q969V5 352 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ARRDC3Q96B67 414 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 AP2M1Q96CW1 435 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ITPKCQ96DU7 683 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF347Q96SE7 839 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 LHPPQ9H008 270 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 LMAN2LQ9H0V9 348 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 TMEM245Q9H330 911 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 SOX17Q9H6I2 414 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 TRPV4Q9HBA0 871 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 THG1LQ9NWX6 298 aaKnown RBP10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 C1orf109Q9NX04 203 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 ARL15Q9NXU5 204 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 BAG5Q9UL15 447 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 HCN2Q9UL51 889 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 PCDHGA8Q9Y5G5 932 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 KIAA1549LQ6ZVL6 1849 aa10.68□□□□□ -0.7
SH3RF1-203ENST00000508685 A0A096LPI6 279 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 EDDM13A0A1B0GTR0 161 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 K7ESM1 405 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 SEC22BO75396 215 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 CREG1O75629 220 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ACPPP15309 386 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PORP16435 677 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF182P17025 639 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ITGB7P26010 798 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 GJA4P35212 333 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 IL12RB1P42701 662 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 RPIAP49247 311 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 CTSCP53634 463 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PLA2G16P53816 162 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 CLDN8P56748 225 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 CXCR4P61073 352 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ISL1P61371 349 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 RUNX3Q13761 415 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 GBX1Q14549 363 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 EIF4HQ15056 248 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PDGFRLQ15198 375 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 RGS21Q2M5E4 152 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 FAM174BQ3ZCQ3 159 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF691Q5VV52 312 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 NIPAL1Q6NVV3 410 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 XKR5Q6UX68 686 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 UBE2R2Q712K3 238 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 CALHM3Q86XJ0 350 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms