RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SLC8A3P57103 927 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 WTAPQ15007 396 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 NTRK2Q16620 822 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 WLSQ5T9L3 541 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 PAQR6Q6TCH4 344 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 P2RY8Q86VZ1 359 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 CERS3Q8IU89 383 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 MINDY1Q8N5J2 469 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 AMER3Q8N944 861 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 MCUQ8NE86 351 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 OR10S1Q8NGN2 331 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 OR1L3Q8NH93 324 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 ZNF519Q8TB69 540 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 ARHGAP45Q92619 1136 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 SLCO2A1Q92959 643 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 SPDL1Q96EA4 605 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 PIGQQ9BRB3 760 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 SDF4Q9BRK5 362 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 MIS12Q9H081 205 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 UPF3AQ9H1J1 476 aaKnown RBP4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 FAM207AQ9NSI2 230 aaPredicted RBP4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 MAN2C1Q9NTJ4 1040 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 GIMAP4Q9NUV9 329 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 PANK4Q9NVE7 773 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 OR6C2Q9NZP2 312 aa4.41□□□□□ -1.7
TOPBP1-206ENST00000508524 COL14A1Q05707 1796 aaKnown RBP4.4□□□□□ -1.7
TOPBP1-206ENST00000508524 PHRF1Q9P1Y6 1649 aaKnown RBP4.4□□□□□ -1.7
TOPBP1-206ENST00000508524 C2orf81A6NN90 581 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 KPNA7A9QM74 516 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 EPM2AB3EWF7 344 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 SOCS3O14543 225 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 MEIS2O14770 477 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 MAGEC1O60732 1142 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 CDK2AP2O75956 126 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 SEC24AO95486 1093 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 SMIM18P0DKX4 95 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 PORP16435 677 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 ALOX12P18054 663 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 TLX1P31314 330 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 HUNKP57058 714 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 HNRNPKP61978 463 aaKnown RBP eCLIP4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 OR13C3Q8NGS6 347 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 PRPF31Q8WWY3 499 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 GTF3AQ92664 365 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 CALML4Q96GE6 196 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 FAM20AQ96MK3 541 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 DPP3Q9NY33 737 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 CRNNQ9UBG3 495 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 TNNQ9UQP3 1299 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 FMN2Q9NZ56 1722 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 RGPD3A6NKT7 1758 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 RGPD4Q7Z3J3 1758 aa4.4□□□□□ -1.71
TOPBP1-206ENST00000508524 HFM1A2PYH4 1435 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 WDR90Q96KV7 1748 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 TRPM3Q9HCF6 1732 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 VTNP04004 478 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 SAT1P21673 171 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 NFATC2Q13469 925 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 BAATQ14032 418 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 TAF1BQ53T94 588 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 GATAD1Q8WUU5 269 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 SLAMF9Q96A28 289 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 SPACA9Q96E40 222 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 ZNF486Q96H40 463 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 LRRC61Q9BV99 259 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 MRPL1Q9BYD6 325 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 OPA3Q9H6K4 179 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 SPHK2Q9NRA0 654 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 CSAG2Q9Y5P2 127 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 PAPPAQ13219 1627 aa4.39□□□□□ -1.71
TOPBP1-206ENST00000508524 KIF1AQ12756 1690 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 ALS2Q96Q42 1657 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 RGPD8O14715 1765 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 SBF2Q86WG5 1849 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 A0A1W2PR80 420 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 HAPLN1P10915 354 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 DARSP14868 501 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 ACADSP16219 412 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 MPZP25189 248 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 CUL4AQ13619 759 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 SLC15A2Q16348 729 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 UGT3A2Q3SY77 523 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 RILPL1Q5EBL4 403 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 ITPRIPL1Q6GPH6 555 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 ZNF343Q6P1L6 599 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 ARHGAP22Q7Z5H3 698 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 TAGAPQ8N103 731 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 GPRC5AQ8NFJ5 357 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 TMCO6Q96DC7 493 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 RSRC1Q96IZ7 334 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 GPATCH1Q9BRR8 931 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 PPANQ9NQ55 473 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 SLC7A10Q9NS82 523 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 GDE1Q9NZC3 331 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 NUDT4Q9NZJ9 180 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 ABT1Q9ULW3 272 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 GPR34Q9UPC5 381 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 PADI2Q9Y2J8 665 aa4.38□□□□□ -1.71
TOPBP1-206ENST00000508524 MOB4Q9Y3A3 225 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms