RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 AMER3Q8N944 861 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 NAT8LQ8N9F0 302 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 PRR7Q8TB68 274 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 COG1Q8WTW3 980 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 MIEF2Q96C03 454 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 C8orf44Q96CB5 159 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 MVB12AQ96EY5 273 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 THOC3Q96J01 351 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 PBKQ96KB5 322 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 SIGLEC10Q96LC7 697 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 AGAP4Q96P64 663 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 GPR21Q99679 349 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 CCDC68Q9H2F9 335 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 ERRFI1Q9UJM3 462 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 DIDO1Q9BTC0 2240 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 A0A1W2PQ72 361 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 IDSB3KWA1 339 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 SMAPO00193 183 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 MAP2K7O14733 419 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 FFAR3O14843 346 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 HAT1O14929 419 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 GPR42O15529 346 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 P2RX6O15547 441 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 MPC1LP0DKB6 136 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 COX6A1P12074 109 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 IMPA1P29218 277 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 SKIV2L2P42285 1042 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 SNRPNP63162 240 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 ATG9BQ674R7 924 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 CYHR1Q6ZMK1 362 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 PIWIL4Q7Z3Z4 852 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 LMNTD2Q8IXW0 634 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 CPNE9Q8IYJ1 553 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 CALML6Q8TD86 181 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 VPS50Q96JG6 964 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 NAP1L3Q99457 506 aaPredicted RBP12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 AARSD1Q9BTE6 412 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 ZNF160Q9HCG1 818 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 C20orf96Q9NUD7 363 aaPredicted RBP12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 PCYOX1Q9UHG3 505 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 DHRS7Q9Y394 339 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 COPG1Q9Y678 874 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 MAD1L1Q9Y6D9 718 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 COMMD10Q9Y6G5 202 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 CELSR2Q9HCU4 2923 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
HMGCS1-205ENST00000508319 ANKUB1A6NFN9 424 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 E2F3O00716 465 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 PRPF4O43172 522 aaKnown RBP eCLIP12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 FOXS1O43638 330 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 NRDCO43847 1150 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 KLHL18O94889 574 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 HAUS5O94927 633 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 DDAH2O95865 285 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 SYF2O95926 243 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 SLC26A3P40879 764 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 TSFMP43897 325 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 GLRBP48167 497 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 FNTAP49354 379 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 EFNA3P52797 238 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 TBPL1P62380 186 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 ABATP80404 500 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 TIAL1Q01085 375 aaKnown RBP eCLIP12.36□□□□□ -0.432e-8■■■■■ 39.8
HMGCS1-205ENST00000508319 RELAQ04206 551 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 CRYMQ14894 314 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 C4orf17Q53FE4 359 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 HSP90AA5PQ58FG0 334 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 RNASEH2BQ5TBB1 312 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 GARNL3Q5VVW2 1013 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 B3GNTL1Q67FW5 361 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 ISLR2Q6UXK2 745 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 ADCK2Q7Z695 626 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 PLD3Q8IV08 490 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 ZC3H7AQ8IWR0 971 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 PPIL6Q8IXY8 311 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 RERGQ96A58 199 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 CNDP1Q96KN2 507 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 FAM167BQ9BTA0 163 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 TGIF2Q9GZN2 237 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 DRC3Q9H069 523 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 EPS8L2Q9H6S3 715 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 ABCF3Q9NUQ8 709 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 C14orf105Q9NVL8 296 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 TRPC4Q9UBN4 977 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 FBXO5Q9UKT4 447 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 CDC14AQ9UNH5 594 aa12.36□□□□□ -0.43
HMGCS1-205ENST00000508319 MYO9AB2RTY4 2548 aa12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 A0A0A6YYC8 382 aaPredicted RBP12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 NSG1A0A0A6YYJ2 146 aa12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 A1L4Q6 167 aa12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 I3L1I5 382 aaPredicted RBP12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 EIF3FO00303 357 aaPredicted RBP12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 ZBTB14O43829 449 aa12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 BANF1O75531 89 aa12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 LDLRP01130 860 aa12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 SOX11P35716 441 aa12.35□□□□□ -0.43
HMGCS1-205ENST00000508319 EEF1A2Q05639 463 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms