RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CTAGE9A4FU28 777 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 ZNF839A8K0R7 811 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 IDSB3KWA1 339 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 I3L1I5 382 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 SMAPO00193 183 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 P2RX6O15547 441 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 SLC16A8O95907 504 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 KRT14P02533 472 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 ANXA5P08758 320 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 PRR35P0CG20 571 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 EDN3P14138 238 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 EZRP15311 586 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 CXCR2P25025 360 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 HSD17B2P37059 387 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 ARG2P78540 354 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 PRDX1Q06830 199 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 THOC5Q13769 683 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 SYT16Q17RD7 645 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 ARMC3Q5W041 872 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 TTC27Q6P3X3 843 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 FAM180AQ6UWF9 173 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 NEK10Q6ZWH5 1172 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 NDUFAF7Q7L592 441 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 ADCK2Q7Z695 626 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 DENND6AQ8IWF6 608 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 ARHGEF39Q8N4T4 335 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 SIRT6Q8N6T7 355 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 TRIM58Q8NG06 486 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 BRIX1Q8TDN6 353 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 ZNF480Q8WV37 535 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 FAR1Q8WVX9 515 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 PSMF1Q92530 271 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 RERGQ96A58 199 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 MMABQ96EY8 250 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 FBXO6Q9NRD1 293 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 RIC8BQ9NVN3 520 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 UTP6Q9NYH9 597 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 PTGFRNQ9P2B2 879 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 OSGIN2Q9Y236 505 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 MED16Q9Y2X0 877 aa10.97□□□□□ -0.65
HMGCS1-204ENST00000507293 POLEQ07864 2286 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 DIDO1Q9BTC0 2240 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 SCN3AQ9NY46 2000 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 IGHV1-45A0A0A0MS14 117 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 A0A1W2PQ72 361 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 DYTNA2CJ06 578 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 E7ENX8 843 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 GOLGA8MH3BSY2 632 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 HAT1O14929 419 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 FOXS1O43638 330 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 KIF5CO60282 957 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 STATHP02808 62 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 SERPINA7P05543 415 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 HEXBP07686 556 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 UQCRHP07919 91 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 CELA2AP08217 269 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 MPC1LP0DKB6 136 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 FDXRP22570 491 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 SOX11P35716 441 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 SLC26A3P40879 764 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 SLC1A2P43004 574 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 TAP2Q03519 686 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 CTBP1Q13363 440 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 THEMIS2Q5TEJ8 643 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 GARNL3Q5VVW2 1013 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 RPUSD3Q6P087 351 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 ZNF549Q6P9A3 640 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 PLD3Q8IV08 490 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 ZC3H7AQ8IWR0 971 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 BCORP1Q8N888 145 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 FBXO15Q8NCQ5 510 aaPredicted RBP10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 OR1N1Q8NGS0 311 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 MAGEB10Q96LZ2 347 aaPredicted RBP10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 GPR21Q99679 349 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 SLX1AQ9BQ83 275 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 DRC3Q9H069 523 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 CCDC68Q9H2F9 335 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 MKKSQ9NPJ1 570 aaPredicted RBP10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 OLAHQ9NV23 265 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 PLA2G3Q9NZ20 509 aa10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 MRPS2Q9Y399 296 aaKnown RBP10.96□□□□□ -0.65
HMGCS1-204ENST00000507293 SCN2AQ99250 2005 aa10.96□□□□□ -0.66
HMGCS1-204ENST00000507293 PRRC2CQ9Y520 2896 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 LOC102723996A0A087X1L8 192 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 ZCWPW2A0A1B0GU75 182 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 SDR42E2A6NKP2 422 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 TXNDC9O14530 226 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 LRRTM2O43300 516 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 BMP10O95393 424 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 MLNP12872 115 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 ENO3P13929 434 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 IMPA1P29218 277 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 EFNA3P52797 238 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 PER3P56645 1201 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 SNRPNP63162 240 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 ABATP80404 500 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 MAT1AQ00266 395 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 RELAQ04206 551 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 PCOLCEQ15113 449 aa10.95□□□□□ -0.66
HMGCS1-204ENST00000507293 CYHR1Q6ZMK1 362 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms