RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 B3GNT3Q9Y2A9 372 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 MRPS2Q9Y399 296 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 SPTBN1Q01082 2364 aaKnown RBP15.48■□□□□ 0.07
SCLT1-204ENST00000503215 H7BY64 318 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 HAT1O14929 419 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 IGHEP01854 428 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 IMPA1P29218 277 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 SKIV2L2P42285 1042 aaKnown RBP15.48■□□□□ 0.07
SCLT1-204ENST00000503215 CDKN2DP55273 166 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 RBBP7Q16576 425 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 MUM1Q2TAK8 710 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 RBM20Q5T481 1227 aaKnown RBP15.48■□□□□ 0.07
SCLT1-204ENST00000503215 MBOAT1Q6ZNC8 495 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 C2CD4AQ8NCU7 369 aaPredicted RBP15.48■□□□□ 0.07
SCLT1-204ENST00000503215 GRK7Q8WTQ7 553 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 EEF1AKMT1Q8WVE0 214 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 PRAP1Q96NZ9 151 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 CRB3Q9BUF7 120 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 ASIC3Q9UHC3 531 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 PCYOX1Q9UHG3 505 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 NTNG1Q9Y2I2 539 aa15.48■□□□□ 0.07
SCLT1-204ENST00000503215 HIVEP3Q5T1R4 2406 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 DNALI1O14645 258 aaPredicted RBP15.47■□□□□ 0.07
SCLT1-204ENST00000503215 FOXS1O43638 330 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 ALPPP05187 535 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 PGAM1P18669 254 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 FBLP22087 321 aaKnown RBP15.47■□□□□ 0.07
SCLT1-204ENST00000503215 HSD17B2P37059 387 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 EFNA3P52797 238 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 SYT16Q17RD7 645 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 PRMT9Q6P2P2 845 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 PAQR3Q6TCH7 311 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 UBE2R2Q712K3 238 aaPredicted RBP15.47■□□□□ 0.07
SCLT1-204ENST00000503215 AMER3Q8N944 861 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 CALML6Q8TD86 181 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 NACC2Q96BF6 587 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 MIEF2Q96C03 454 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 EBNA1BP2Q99848 306 aaKnown RBP15.47■□□□□ 0.07
SCLT1-204ENST00000503215 MACROD1Q9BQ69 325 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 WDR83Q9BRX9 315 aaKnown RBP15.47■□□□□ 0.07
SCLT1-204ENST00000503215 SEMA3GQ9NS98 782 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 TRPC4Q9UBN4 977 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 ZNF282Q9UDV7 671 aaPredicted RBP15.47■□□□□ 0.07
SCLT1-204ENST00000503215 C3orf18Q9UK00 162 aa15.47■□□□□ 0.07
SCLT1-204ENST00000503215 NXT1Q9UKK6 140 aaKnown RBP15.47■□□□□ 0.07
SCLT1-204ENST00000503215 IGLV3-12A0A075B6K2 115 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 A0A0A6YYC8 382 aaPredicted RBP15.46■□□□□ 0.07
SCLT1-204ENST00000503215 GOLGA6L10A0A0M3HER8 536 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 I3L1I5 382 aaPredicted RBP15.46■□□□□ 0.07
SCLT1-204ENST00000503215 ZBTB14O43829 449 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 AHSGP02765 367 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 ENO3P13929 434 aaPredicted RBP15.46■□□□□ 0.07
SCLT1-204ENST00000503215 MAT1AQ00266 395 aaKnown RBP15.46■□□□□ 0.07
SCLT1-204ENST00000503215 OCA2Q04671 838 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 PTK6Q13882 451 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 ZXDCQ2QGD7 858 aaPredicted RBP15.46■□□□□ 0.07
SCLT1-204ENST00000503215 BBS9Q3SYG4 887 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 TUBB8Q3ZCM7 444 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 FHL5Q5TD97 284 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 ATG9BQ674R7 924 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 FAAH2Q6GMR7 532 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 Q6ZS92 163 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 ADCK2Q7Z695 626 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 ZADH2Q8N4Q0 377 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 THOC3Q96J01 351 aaKnown RBP15.46■□□□□ 0.07
SCLT1-204ENST00000503215 FAM167BQ9BTA0 163 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 YIPF2Q9BWQ6 316 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 ILKAPQ9H0C8 392 aaPredicted RBP15.46■□□□□ 0.07
SCLT1-204ENST00000503215 ZNF160Q9HCG1 818 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 PDE10AQ9Y233 779 aa15.46■□□□□ 0.07
SCLT1-204ENST00000503215 CES2O00748 559 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 ZSCAN12O43309 604 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 VPS26AO75436 327 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 KLHL18O94889 574 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 AGFG2O95081 481 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 GP1BBP13224 206 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 SLC26A3P40879 764 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 GLRBP48167 497 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 CARSP49589 748 aaKnown RBP15.45■□□□□ 0.06
SCLT1-204ENST00000503215 EMP3P54852 163 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 DSG2Q14126 1118 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 NR6A1Q15406 480 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 PHKG1Q16816 387 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 THEMIS2Q5TEJ8 643 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 NUP210LQ5VU65 1888 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 TRMT10BQ6PF06 316 aaKnown RBP15.45■□□□□ 0.06
SCLT1-204ENST00000503215 VN1R4Q7Z5H5 301 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 LMNTD2Q8IXW0 634 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 IQCKQ8N0W5 287 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 MMABQ96EY8 250 aaPredicted RBP15.45■□□□□ 0.06
SCLT1-204ENST00000503215 PDLIM2Q96JY6 352 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 CAPZA3Q96KX2 299 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 ATG10Q9H0Y0 220 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 TRMT6Q9UJA5 497 aaKnown RBP15.45■□□□□ 0.06
SCLT1-204ENST00000503215 PCDHGA10Q9Y5H3 936 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 COMMD10Q9Y6G5 202 aa15.45■□□□□ 0.06
SCLT1-204ENST00000503215 ZNF839A8K0R7 811 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 JRKO75564 520 aa15.44■□□□□ 0.06
SCLT1-204ENST00000503215 IPO13O94829 963 aaKnown RBP15.44■□□□□ 0.06
SCLT1-204ENST00000503215 CCNDBP1O95273 360 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms