RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 METTL21AQ8WXB1 218 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 ZNF354BQ96LW1 612 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 PLCD4Q9BRC7 762 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 ENKD1Q9H0I2 346 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 UTP6Q9NYH9 597 aaKnown RBP16.74■□□□□ 0.27
NUP50-218ENST00000493456 GNPTGQ9UJJ9 305 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 PCDHA13Q9Y5I0 950 aa16.74■□□□□ 0.27
NUP50-218ENST00000493456 ASPDHA6ND91 283 aa16.73■□□□□ 0.27
NUP50-218ENST00000493456 FAM227AF5H4B4 570 aa16.73■□□□□ 0.27
NUP50-218ENST00000493456 WISP2O76076 250 aa16.73■□□□□ 0.27
NUP50-218ENST00000493456 PTMAP06454 111 aaKnown RBP16.73■□□□□ 0.27
NUP50-218ENST00000493456 PKMP14618 531 aaKnown RBP16.73■□□□□ 0.27
NUP50-218ENST00000493456 CD1EP15812 388 aa16.73■□□□□ 0.27
NUP50-218ENST00000493456 HKDC1Q2TB90 917 aa16.73■□□□□ 0.27
NUP50-218ENST00000493456 ACER2Q5QJU3 275 aa16.73■□□□□ 0.27
NUP50-218ENST00000493456 EID3Q8N140 333 aa16.73■□□□□ 0.27
NUP50-218ENST00000493456 RERGQ96A58 199 aaPredicted RBP16.73■□□□□ 0.27
NUP50-218ENST00000493456 MRPS30Q9NP92 439 aaKnown RBP16.73■□□□□ 0.27
NUP50-218ENST00000493456 CATSPERZQ9NTU4 200 aa16.73■□□□□ 0.27
NUP50-218ENST00000493456 C19orf25Q9UFG5 118 aaPredicted RBP16.73■□□□□ 0.27
NUP50-218ENST00000493456 KRT87PA6NCN2 255 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 A8MUI8 341 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 FOXS1O43638 330 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 ERGP11308 486 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 EZRP15311 586 aaKnown RBP16.72■□□□□ 0.27
NUP50-218ENST00000493456 EEF1DP29692 281 aaKnown RBP16.72■□□□□ 0.27
NUP50-218ENST00000493456 GDF10P55107 478 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 TUBA3CQ13748 450 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 FAM53BQ14153 422 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 FASTKQ14296 549 aaKnown RBP16.72■□□□□ 0.27
NUP50-218ENST00000493456 SPA17Q15506 151 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 BTBD16Q32M84 506 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 H3F3CQ6NXT2 135 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 AADACL2Q6P093 401 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 LRRC8BQ6P9F7 803 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 TUBA3EQ6PEY2 450 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 PPP1R21Q6ZMI0 780 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 PAQR7Q86WK9 346 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 LRRC6Q86X45 466 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 BEST3Q8N1M1 668 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 ARHGEF39Q8N4T4 335 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 TMEM178AQ8NBL3 297 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 FAM98AQ8NCA5 519 aaKnown RBP16.72■□□□□ 0.27
NUP50-218ENST00000493456 MDS2Q8NDY4 140 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 SCMH1Q96GD3 660 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 ZNF778Q96MU6 729 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 TREX2Q9BQ50 279 aaPredicted RBP16.72■□□□□ 0.27
NUP50-218ENST00000493456 ACAT2Q9BWD1 397 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 TFR2Q9UP52 801 aa16.72■□□□□ 0.27
NUP50-218ENST00000493456 RUVBL2Q9Y230 463 aaKnown RBP16.72■□□□□ 0.27
NUP50-218ENST00000493456 A0A0A6YYC8 382 aaPredicted RBP16.71■□□□□ 0.27
NUP50-218ENST00000493456 I3L1I5 382 aaPredicted RBP16.71■□□□□ 0.27
NUP50-218ENST00000493456 SEC24DO94855 1032 aaPredicted RBP16.71■□□□□ 0.27
NUP50-218ENST00000493456 SUN1O94901 812 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 CD46P15529 392 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 ABOP16442 354 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 RPS3P23396 243 aaKnown RBP eCLIP16.71■□□□□ 0.27
NUP50-218ENST00000493456 RPA3P35244 121 aaPredicted RBP16.71■□□□□ 0.27
NUP50-218ENST00000493456 EFNA3P52797 238 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 YBX1P67809 324 aaKnown RBP16.71■□□□□ 0.27
NUP50-218ENST00000493456 CSNK1G2P78368 415 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 RELAQ04206 551 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 NDUFA9Q16795 377 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 MEP1AQ16819 746 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 SYT16Q17RD7 645 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 CPEB2Q7Z5Q1 589 aaKnown RBP16.71■□□□□ 0.27
NUP50-218ENST00000493456 CCDC170Q8IYT3 715 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 GHDCQ8N2G8 530 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 TAB3Q8N5C8 712 aaPredicted RBP16.71■□□□□ 0.27
NUP50-218ENST00000493456 SMPDL3AQ92484 453 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 ALG3Q92685 438 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 POM121Q96HA1 1249 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 FRMD6Q96NE9 622 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 SIGLEC12Q96PQ1 595 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 OR2A5Q96R48 311 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 UTP23Q9BRU9 249 aaKnown RBP16.71■□□□□ 0.27
NUP50-218ENST00000493456 TMEM121Q9BTD3 319 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 VN1R1Q9GZP7 353 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 P2RY12Q9H244 342 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 TCAF1Q9Y4C2 921 aa16.71■□□□□ 0.27
NUP50-218ENST00000493456 DNHD1Q96M86 4753 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 ZNF469Q96JG9 3925 aaPredicted RBP16.7■□□□□ 0.26
NUP50-218ENST00000493456 IGKV1-8A0A0C4DH67 115 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 A0A0U1RQJ8 604 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 NPIPA5E9PKD4 350 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 E9PLN8 166 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 CCNDBP1O95273 360 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 MATN4O95460 622 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 TSPAN12O95859 305 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 ATP5DP30049 168 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 AVPR1BP47901 424 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 ARHGAP19Q14CB8 494 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 OR1C1Q15619 314 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 EXT1Q16394 746 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 ZNF425Q6IV72 752 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 MEX3BQ6ZN04 569 aaKnown RBP16.7■□□□□ 0.26
NUP50-218ENST00000493456 LDB1Q86U70 411 aaPredicted RBP16.7■□□□□ 0.26
NUP50-218ENST00000493456 SIAH3Q8IW03 269 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 MPP5Q8N3R9 675 aa16.7■□□□□ 0.26
NUP50-218ENST00000493456 HORMAD2Q8N7B1 307 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms