RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 C17orf64Q86WR6 236 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 CNTN4Q8IWV2 1026 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 METTL27Q8N6F8 245 aaPredicted RBP15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 STT3BQ8TCJ2 826 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 METTL21AQ8WXB1 218 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 TRIM56Q9BRZ2 755 aaKnown RBP15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 HAUS8Q9BT25 410 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 LHPPQ9H008 270 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 DRC3Q9H069 523 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 MKKSQ9NPJ1 570 aaPredicted RBP15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 NSMCE4AQ9NXX6 385 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 ZFATQ9P243 1243 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 GALPQ9UBC7 116 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 C3orf18Q9UK00 162 aa15.8■□□□□ 0.12
PDLIM2-217ENST00000491330 SEC16AO15027 2179 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 LOC105369274A0A096LPK9 316 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 LOC102723532A0A0G2JNH3 316 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 AGFG2O95081 481 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 ZGLP1P0C6A0 271 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 ICAM2P13598 275 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 GCGRP47871 477 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 CKAP4Q07065 602 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 FAM53BQ14153 422 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 SLC6A19Q695T7 634 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 CAPN13Q6MZZ7 669 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 FAM45BPQ6NSW5 357 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 ZNF549Q6P9A3 640 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 SHISA6Q6ZSJ9 500 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 OR4N4Q8N0Y3 316 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 GPATCH11Q8N954 259 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 CAMKVQ8NCB2 501 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 PPFIBP2Q8ND30 876 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 SPATA4Q8NEY3 305 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 FAM45AQ8TCE6 357 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 ALKBH8Q96BT7 664 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 VPS39Q96JC1 886 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 SPSB2Q99619 263 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 PHACTR1Q9C0D0 580 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 LRRC4CQ9HCJ2 640 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 SLC6A20Q9NP91 592 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 SLC22A11Q9NSA0 550 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 TXNDC16Q9P2K2 825 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 MAP4K5Q9Y4K4 846 aa15.79■□□□□ 0.12
PDLIM2-217ENST00000491330 PCM1Q15154 2024 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 NSG1A0A0A6YYJ2 146 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 VSTM2BA6NLU5 285 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 EFCAB8A8MWE9 144 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 H7BY64 318 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 HPP00738 406 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 SLC12A2P55011 1212 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 AP1S2P56377 157 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 CAV1Q03135 178 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 KLC1Q07866 573 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 CALCOCO2Q13137 446 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 PRTGQ2VWP7 1150 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 NIPAL1Q6NVV3 410 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 CYHR1Q6ZMK1 362 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 ZNF572Q7Z3I7 529 aaPredicted RBP15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 PIWIL4Q7Z3Z4 852 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 PARP9Q8IXQ6 854 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 KBTBD2Q8IY47 623 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 PRSS58Q8IYP2 241 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 EEF1AKMT1Q8WVE0 214 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 LINGO1Q96FE5 620 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 CFAP36Q96G28 342 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 THOC3Q96J01 351 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 PRAP1Q96NZ9 151 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 NDNQ99608 321 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 ZNF552Q9H707 407 aaPredicted RBP15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 ARL15Q9NXU5 204 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 WHRNQ9P202 907 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 CTSFQ9UBX1 484 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 C19orf25Q9UFG5 118 aaPredicted RBP15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 VWA7Q9Y334 891 aa15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 COPG1Q9Y678 874 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-217ENST00000491330 DYTNA2CJ06 578 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 KIF2AO00139 706 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 EIF3HO15372 352 aaKnown RBP eCLIP15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 TTI1O43156 1089 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 WFS1O76024 890 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 SORBS2O94875 1100 aaKnown RBP15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 ENO2P09104 434 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 IMPA1P29218 277 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 ELK3P41970 407 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 GLRBP48167 497 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 KCTD19Q17RG1 926 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 ZNF425Q6IV72 752 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 AGTRAPQ6RW13 159 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 NDUFAF7Q7L592 441 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 GIMAP7Q8NHV1 300 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 DNAJB14Q8TBM8 379 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 CDKL2Q92772 493 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 OR2A5Q96R48 311 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 SLC30A3Q99726 388 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 WDR77Q9BQA1 342 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 RAB17Q9H0T7 212 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 ANKHQ9HCJ1 492 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 RIC8BQ9NVN3 520 aa15.77■□□□□ 0.12
PDLIM2-217ENST00000491330 TEKT2Q9UIF3 430 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms