RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 TNK1Q13470 666 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 FAM174BQ3ZCQ3 159 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 PDLIM3Q53GG5 364 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 SLC25A53Q5H9E4 307 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 MPP7Q5T2T1 576 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 FAM53AQ6NSI3 398 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 ZNF449Q6P9G9 518 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 CTR9Q6PD62 1173 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 ZNF790Q6PG37 636 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 ZNF329Q86UD4 541 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 APLFQ8IW19 511 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 KIRREL3Q8IZU9 778 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 MARVELD2Q8N4S9 558 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 NKAIN3Q8N8D7 197 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 OCC1Q8TAD7 63 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 ARHGAP45Q92619 1136 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 RAD54LQ92698 747 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 TSACCQ96A04 125 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 CENPTQ96BT3 561 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 PITPNM3Q9BZ71 974 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 TXLNGQ9NUQ3 528 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 PKD2L2Q9NZM6 624 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 OR6C2Q9NZP2 312 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 RASAL2Q9UJF2 1139 aa3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 AHDC1Q5TGY3 1603 aaPredicted RBP3.15□□□□□ -1.91
AC055855.1-201ENST00000489563 ITPR3Q14573 2671 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 VWDEQ8N2E2 1590 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 EYSQ5T1H1 3165 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 IGHV4-4A0A075B6R2 117 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 EXTL3O43909 919 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 CDK2AP2O75956 126 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 AP2A2O94973 939 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 SIX3O95343 332 aaPredicted RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 SLU7O95391 586 aaKnown RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 SERPING1P05155 500 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 GPIP06744 558 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 CEACAM1P13688 526 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 GNB3P16520 340 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 ALDH1B1P30837 517 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 NKX2-1P43699 371 aaPredicted RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 LBX1P52954 281 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 MFAP3P55082 362 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 PTENP60484 403 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 PTK6Q13882 451 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 TUBB2AQ13885 445 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 TEAD2Q15562 447 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 RBBP7Q16576 425 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 TWISTNBQ3B726 338 aaPredicted RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 KRTAP24-1Q3LI83 254 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 ALDH1L2Q3SY69 923 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 LBHQ53QV2 105 aaPredicted RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 SPOUT1Q5T280 376 aaKnown RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 UGT3A1Q6NUS8 523 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 TMEM207Q6UWW9 146 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 MSANTD1Q6ZTZ1 278 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 DEFB132Q7Z7B7 95 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 PHLDB2Q86SQ0 1253 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 KLHL7Q8IXQ5 586 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 KLHDC1Q8N7A1 406 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 CCDC63Q8NA47 563 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 DDHD1Q8NEL9 900 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 GPRC5AQ8NFJ5 357 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 OR7A2PQ8NGA2 310 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 OR2T11Q8NH01 316 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 FAM76AQ8TAV0 307 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 SLC26A7Q8TE54 656 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 METTL21AQ8WXB1 218 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 DYRK2Q92630 601 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 ST6GALNAC6Q969X2 333 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 ATP6V1E2Q96A05 226 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 PYCR2Q96C36 320 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 LGALS12Q96DT0 336 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 BSCL2Q96G97 398 aaPredicted RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 ERO1AQ96HE7 468 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 MAP3K3Q99759 626 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 TUBB2BQ9BVA1 445 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 RIMS4Q9H426 269 aaPredicted RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 ACTL8Q9H568 366 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 ZNF71Q9NQZ8 489 aaPredicted RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 DDX43Q9NXZ2 648 aaKnown RBP3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 MAN1B1Q9UKM7 699 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 GAB2Q9UQC2 676 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 KCNK7Q9Y2U2 307 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 ALKQ9UM73 1620 aa3.14□□□□□ -1.91
AC055855.1-201ENST00000489563 GCN1Q92616 2671 aaKnown RBP3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 ZNF292O60281 2723 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 GOLGB1Q14789 3259 aaKnown RBP3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 O00370 1275 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 PSMD14O00487 310 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 PRAF2O60831 178 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 SOCS5O75159 536 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 LBPP18428 481 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 CASTP20810 708 aaKnown RBP3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 PSMB4P28070 264 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 SFTPDP35247 375 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 SOAT1P35610 550 aa3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 GMPSP49915 693 aaPredicted RBP3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 SNRPD1P62314 119 aaKnown RBP3.13□□□□□ -1.91
AC055855.1-201ENST00000489563 GNB1P62873 340 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms