RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 A0A0A6YYC8 382 aaPredicted RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 TRAV17A0A0B4J275 112 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 A0A1B0GUH1 482 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 ARHGAP10A1A4S6 786 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 I3L1I5 382 aaPredicted RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 PCDH17O14917 1159 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 P2RX6O15547 441 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 HNRNPRO43390 633 aaKnown RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 BMP10O95393 424 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 F10P00742 488 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 HEXBP07686 556 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 TPSB2P20231 275 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 CHRM3P20309 590 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 OGNP20774 298 aaKnown RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 KCNJ1P48048 391 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 PNLIPRP1P54315 467 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 SNRPNP63162 240 aaKnown RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 PRDX1Q06830 199 aaKnown RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 ARHGAP19Q14CB8 494 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 PCOLCEQ15113 449 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 TPSAB1Q15661 275 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 SYT16Q17RD7 645 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 GARNL3Q5VVW2 1013 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 ICE2Q659A1 982 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 KIAA0930Q6ICG6 404 aaPredicted RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 C4orf22Q6V702 233 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 CENPUQ71F23 418 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 GSTA5Q7RTV2 222 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 SDCCAG8Q86SQ7 713 aaPredicted RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 ZC3H7AQ8IWR0 971 aaKnown RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 MARVELD3Q96A59 401 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 TCF12Q99081 682 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 PKP4Q99569 1192 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 SLC30A3Q99726 388 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 TSGA10Q9BZW7 698 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 MKKSQ9NPJ1 570 aaPredicted RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 FAM114A2Q9NRY5 505 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 RIC8BQ9NVN3 520 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 PCYOX1Q9UHG3 505 aa11.77□□□□□ -0.53
CPSF3-204ENST00000489403 DRG1Q9Y295 367 aaKnown RBP11.77□□□□□ -0.53
CPSF3-204ENST00000489403 E5RI56 91 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 PRSS44E7EML9 344 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 HAT1O14929 419 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 PFDN6O15212 129 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 WFS1O76024 890 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 CCNDBP1O95273 360 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 WDPCPO95876 746 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 SLC16A8O95907 504 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 CATP04040 527 aaKnown RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 UQCRHP07919 91 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 F7P08709 466 aaPredicted RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 ANXA5P08758 320 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 ITGAMP11215 1152 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 PKMP14618 531 aaKnown RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 EZRP15311 586 aaKnown RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 CLCN7P51798 805 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 MAT1AQ00266 395 aaKnown RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 RPS6KA1Q15418 735 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 SP5Q6BEB4 398 aaPredicted RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 HIBCHQ6NVY1 386 aaPredicted RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 TMEM205Q6UW68 189 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 RIPOR1Q6ZS17 1223 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 CILP2Q8IUL8 1156 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 SPC24Q8NBT2 197 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 GIMAP7Q8NHV1 300 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 ZNF480Q8WV37 535 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 RELTQ969Z4 430 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 RERGQ96A58 199 aaPredicted RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 UNKQ9C0B0 810 aaKnown RBP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 DRC3Q9H069 523 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.76□□□□□ -0.53
CPSF3-204ENST00000489403 ZNF700Q9H0M5 742 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 COPG2Q9UBF2 871 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 MKL2Q9ULH7 1088 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 CREBBPQ92793 2442 aa11.76□□□□□ -0.53
CPSF3-204ENST00000489403 ZNF839A8K0R7 811 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 E7ENX8 843 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 AVILO75366 819 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 MST1P26927 711 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 HSD17B2P37059 387 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 TERF1P54274 439 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 CDK16Q00536 496 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 TAP2Q03519 686 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 SRSF11Q05519 484 aaKnown RBP11.75□□□□□ -0.53
CPSF3-204ENST00000489403 CUL1Q13616 776 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 FAM53BQ14153 422 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 GFRALQ6UXV0 394 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 NEK10Q6ZWH5 1172 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 ADCK2Q7Z695 626 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 GAS2L3Q86XJ1 694 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 PLD3Q8IV08 490 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 REXO1L1PQ8IX06 675 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 SHISA5Q8N114 240 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 FBXO15Q8NCQ5 510 aaPredicted RBP11.75□□□□□ -0.53
CPSF3-204ENST00000489403 IMMP1LQ96LU5 166 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 RNF32Q9H0A6 362 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 ABCF3Q9NUQ8 709 aa11.75□□□□□ -0.53
CPSF3-204ENST00000489403 INTS10Q9NVR2 710 aaKnown RBP11.75□□□□□ -0.53
CPSF3-204ENST00000489403 UTP6Q9NYH9 597 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms