RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 C11orf63Q6NUN7 778 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 FAAP20Q6NZ36 180 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 FAM114A1Q8IWE2 563 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 TRIML1Q8N9V2 468 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 TRIM58Q8NG06 486 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 LITAFQ99732 161 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 TUBB2BQ9BVA1 445 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 MXD3Q9BW11 206 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 CCDC106Q9BWC9 280 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 PPANQ9NQ55 473 aaKnown RBP3.91□□□□□ -1.78
ITGB1-214ENST00000488427 MBNL1Q9NR56 388 aaKnown RBP3.91□□□□□ -1.78
ITGB1-214ENST00000488427 GDE1Q9NZC3 331 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 GRID1Q9ULK0 1009 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 CACNA1HO95180 2353 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 MAP3K19Q56UN5 1328 aa3.91□□□□□ -1.78
ITGB1-214ENST00000488427 SPTBN2O15020 2390 aa3.9□□□□□ -1.78
ITGB1-214ENST00000488427 LRRC37A2A6NM11 1700 aa3.9□□□□□ -1.78
ITGB1-214ENST00000488427 ZFHX4Q86UP3 3567 aa3.9□□□□□ -1.78
ITGB1-214ENST00000488427 IGHV4-4A0A075B6R2 117 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 IGLV9-49A0A0B4J1Y8 123 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 ANKRD61A6NGH8 418 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 DNM1LO00429 736 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 MEIS2O14770 477 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 ARHGEF9O43307 516 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 PAK4O96013 591 aaPredicted RBP3.9□□□□□ -1.79
ITGB1-214ENST00000488427 NR2F1P10589 423 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 MAGEA11P43364 429 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 ALDH3A2P51648 485 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 SNRPD1P62314 119 aaKnown RBP3.9□□□□□ -1.79
ITGB1-214ENST00000488427 GNB1P62873 340 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 ODF4Q2M2E3 257 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 SGSM1Q2NKQ1 1148 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 C20orf194Q5TEA3 1177 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 MFSD4BQ5TF39 518 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 GARNL3Q5VVW2 1013 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 RAB42Q8N4Z0 105 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 ZNF611Q8N823 705 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 ZNF383Q8NA42 475 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 DGAT2Q96PD7 388 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 GCNAQ96QF7 691 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 URM1Q9BTM9 101 aaKnown RBP3.9□□□□□ -1.79
ITGB1-214ENST00000488427 WDR13Q9H1Z4 485 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 P2RY12Q9H244 342 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 ARRDC1-AS1Q9H2J1 176 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 ZDHHC18Q9NUE0 388 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 TAB2Q9NYJ8 693 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 TMOD3Q9NYL9 352 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 SLC24A2Q9UI40 661 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 TTLL3Q9Y4R7 772 aa3.9□□□□□ -1.79
ITGB1-214ENST00000488427 A0A087WW49 117 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 HEPACAM2A8MVW5 462 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 TCERG1O14776 1098 aaKnown RBP3.89□□□□□ -1.79
ITGB1-214ENST00000488427 TRMUO75648 421 aaKnown RBP3.89□□□□□ -1.79
ITGB1-214ENST00000488427 AP2A2O94973 939 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 TRUB2O95900 331 aaKnown RBP3.89□□□□□ -1.79
ITGB1-214ENST00000488427 CA4P22748 312 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 PCGF2P35227 344 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 MNDAP41218 407 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 WNT5AP41221 380 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 TPD52P55327 224 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-214ENST00000488427 HILS1P60008 231 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 ZFP69Q49AA0 526 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 C9orf152Q5JTZ5 239 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 DCAF10Q5QP82 559 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 FAM53AQ6NSI3 398 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-214ENST00000488427 DET1Q7L5Y6 550 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 LINC00346Q8IVM7 164 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 MAML2Q8IZL2 1156 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-214ENST00000488427 CDK20Q8IZL9 346 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 RYBPQ8N488 228 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-214ENST00000488427 OR5M8Q8NGP6 311 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 SSMEM1Q8WWF3 244 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 IRGQQ8WZA9 623 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 DYRK2Q92630 601 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 CENPTQ96BT3 561 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 DHX58Q96C10 678 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 ARSGQ96EG1 525 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 NUP85Q9BW27 656 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 ANKZF1Q9H8Y5 726 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 FGF22Q9HCT0 170 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 SERINC1Q9NRX5 453 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 CACNG4Q9UBN1 327 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 ZHX1Q9UKY1 873 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-214ENST00000488427 ZFYVE26Q68DK2 2539 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 ZNF462Q96JM2 2506 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 CDHR2Q9BYE9 1310 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 GVINP1Q7Z2Y8 2422 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 ROCK1Q13464 1354 aa3.89□□□□□ -1.79
ITGB1-214ENST00000488427 MGAMO43451 1857 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 DDX60LQ5H9U9 1706 aaKnown RBP3.88□□□□□ -1.79
ITGB1-214ENST00000488427 MEIOCA2RUB1 952 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 SLC22A2O15244 555 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 GJB3O75712 270 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 GAS8-AS1O95177 125 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 WDPCPO95876 746 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 DANCRP0C864 163 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 TRIM49P0CI25 452 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 TRIM49CP0CI26 452 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 CEACAM1P13688 526 aa3.88□□□□□ -1.79
ITGB1-214ENST00000488427 CAPZA2P47755 286 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms