RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 OR4K3Q96R72 315 aa11.93□□□□□ -0.5
PTCD2-204ENST00000486995 RIOK2Q9BVS4 552 aaKnown RBP11.93□□□□□ -0.5
PTCD2-204ENST00000486995 DGCR6LQ9BY27 220 aa11.93□□□□□ -0.5
PTCD2-204ENST00000486995 LINC00597Q9H2U6 94 aa11.93□□□□□ -0.5
PTCD2-204ENST00000486995 PCDH12Q9NPG4 1184 aa11.93□□□□□ -0.5
PTCD2-204ENST00000486995 ASAH2Q9NR71 780 aa11.93□□□□□ -0.5
PTCD2-204ENST00000486995 TRIM17Q9Y577 477 aa11.93□□□□□ -0.5
PTCD2-204ENST00000486995 hCG_2039718K7EN88 272 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 M0QX08 132 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CCL16O15467 120 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 LEFTY1O75610 366 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 INMTO95050 263 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 ETHE1O95571 254 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CPSF4O95639 269 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 BCL10O95999 233 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CYP2A6P11509 494 aaPredicted RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 TIMP2P16035 220 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 ITIH1P19827 911 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 HTR1BP28222 390 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CLK3P49761 638 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 BMXP51813 675 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 C21orf58P58505 322 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CREMQ03060 361 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 NAE1Q13564 534 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 DDX39BQ13838 428 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 SIM2Q14190 667 aaPredicted RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 TBC1D25Q3MII6 688 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 ADNP2Q6IQ32 1131 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 SLC16A12Q6ZSM3 486 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CCDC149Q6ZUS6 474 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 ZBTB46Q86UZ6 589 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 TRAM1L1Q8N609 369 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 LILRA3Q8N6C8 439 aaPredicted RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 KREMEN2Q8NCW0 462 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 ABTB1Q969K4 478 aaPredicted RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 TCEAL4Q96EI5 215 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 FAM83CQ9BQN1 747 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 FAM120CQ9NX05 1096 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 BAG5Q9UL15 447 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 RUVBL1Q9Y265 456 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 NUP214P35658 2090 aaPredicted RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 H0YIV9 168 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 TSPAN6O43657 245 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 UGT2B11O75310 529 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 FABP3P05413 133 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 TYRP14679 529 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 EFNA1P20827 205 aaPredicted RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 PPM1AP35813 382 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CTSCP53634 463 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 MLLT10P55197 1068 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 GP2P55259 537 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 RAE1P78406 368 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 IL5RAQ01344 420 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 AQP6Q13520 282 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 ARHGEF6Q15052 776 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 ARSIQ5FYB1 569 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 DUS1LQ6P1R4 473 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 ERICH5Q6P6B1 374 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 AGTRAPQ6RW13 159 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CBLL1Q75N03 491 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 MIPOL1Q8TD10 442 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 SORCS1Q8WY21 1168 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 IRF7Q92985 503 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 CLP1Q92989 425 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 HEPHQ9BQS7 1158 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 RNF208Q9H0X6 261 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 RHBDL2Q9NX52 303 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 STOX2Q9P2F5 926 aaPredicted RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 WARS2Q9UGM6 360 aaKnown RBP11.92□□□□□ -0.5
PTCD2-204ENST00000486995 RPS6KA6Q9UK32 745 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 LAMA3Q16787 3333 aa11.92□□□□□ -0.5
PTCD2-204ENST00000486995 DOCK6Q96HP0 2047 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 GABRR3A8MPY1 467 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 TTC34A8MYJ7 566 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 MYO1GB0I1T2 1018 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 XYLBO75191 536 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 BCAS1O75363 584 aaPredicted RBP11.91□□□□□ -0.5
PTCD2-204ENST00000486995 ANGPTL1O95841 491 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 TFPTP0C1Z6 253 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 CYP4B1P13584 511 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 FSHRP23945 695 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 DNAJA1P31689 397 aaKnown RBP11.91□□□□□ -0.5
PTCD2-204ENST00000486995 RECQLP46063 649 aaPredicted RBP11.91□□□□□ -0.5
PTCD2-204ENST00000486995 PREPP48147 710 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 ARHGDIAP52565 204 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 WDR5P61964 334 aaKnown RBP11.91□□□□□ -0.5
PTCD2-204ENST00000486995 EMX1Q04741 257 aaPredicted RBP11.91□□□□□ -0.5
PTCD2-204ENST00000486995 ACSM2AQ08AH3 577 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 SPCS2Q15005 226 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 ACSM2BQ68CK6 577 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 LAIR1Q6GTX8 287 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 GRHL2Q6ISB3 625 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 CAPN13Q6MZZ7 669 aaPredicted RBP11.91□□□□□ -0.5
PTCD2-204ENST00000486995 CRTC3Q6UUV7 619 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 EIF3MQ7L2H7 374 aaKnown RBP11.91□□□□□ -0.5
PTCD2-204ENST00000486995 B3GNT8Q7Z7M8 397 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 RASGEF1AQ8N9B8 481 aa11.91□□□□□ -0.5
PTCD2-204ENST00000486995 CDC26Q8NHZ8 85 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms