RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 VPS26AO75436 327 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 UNC5CO95185 931 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 RASAL1O95294 804 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 ERVK-10P10266 1014 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 PKMP14618 531 aaKnown RBP12.36□□□□□ -0.43
HDAC6-227ENST00000485102 MST1P26927 711 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 HTR1EP28566 365 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 HSD17B2P37059 387 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 PCOLCEQ15113 449 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 RPS6KA1Q15418 735 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 LDB1Q86U70 411 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-227ENST00000485102 PAQR7Q86WK9 346 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 PRSS58Q8IYP2 241 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 SIRT6Q8N6T7 355 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 PPHLN1Q8NEY8 458 aaKnown RBP12.36□□□□□ -0.43
HDAC6-227ENST00000485102 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 SMPDL3AQ92484 453 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 HES6Q96HZ4 224 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 CABS1Q96KC9 395 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 BIRC8Q96P09 236 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 OR2A5Q96R48 311 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 TUBB6Q9BUF5 446 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDAC6-227ENST00000485102 KCNF1Q9H3M0 494 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 CHRAC1Q9NRG0 131 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
HDAC6-227ENST00000485102 TRPC4Q9UBN4 977 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 SEC14L3Q9UDX4 400 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 RUVBL1Q9Y265 456 aaKnown RBP12.36□□□□□ -0.43
HDAC6-227ENST00000485102 SETD2Q9BYW2 2564 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 TRGV8A0A0C4DH27 118 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 IGKV1-8A0A0C4DH67 115 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 E7EVH7 732 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 MYO1CO00159 1063 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 CCL21O00585 134 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 FOXS1O43638 330 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 LIASO43766 372 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 PRAMEF2O60811 474 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 NDUFS3O75489 264 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 EIF2S1P05198 315 aaKnown RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 HEXBP07686 556 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 BDKRB1P46663 353 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 YBX1P67809 324 aaKnown RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 RBPJQ06330 500 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 PRDX1Q06830 199 aaKnown RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 FASTKQ14296 549 aaKnown RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 ANKRD20A4Q4UJ75 823 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 ABHD17BQ5VST6 288 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 ZNF425Q6IV72 752 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 HIBCHQ6NVY1 386 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 H3F3CQ6NXT2 135 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 LRRC8BQ6P9F7 803 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 TAB3Q8N5C8 712 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 CSNK1A1LQ8N752 337 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 SUN3Q8TAQ9 357 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 THAP3Q8WTV1 239 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 LURAP1Q96LR2 239 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 TCF12Q99081 682 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 IL22Q9GZX6 179 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 MRPS30Q9NP92 439 aaKnown RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 EIF2B3Q9NR50 452 aaKnown RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 STMN3Q9NZ72 180 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 STOX2Q9P2F5 926 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 TEKT2Q9UIF3 430 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
HDAC6-227ENST00000485102 CELSR1Q9NYQ6 3014 aa12.35□□□□□ -0.43
HDAC6-227ENST00000485102 TACC2O95359 2948 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 H3BMM5 538 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 AP3B1O00203 1094 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 CDK2AP1O14519 115 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 PSIP1O75475 530 aaKnown RBP12.34□□□□□ -0.43
HDAC6-227ENST00000485102 APRTP07741 180 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 ITGAMP11215 1152 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 EZRP15311 586 aaKnown RBP12.34□□□□□ -0.43
HDAC6-227ENST00000485102 LONRF1Q17RB8 773 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 KRTCAP3Q53RY4 240 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 CTSL3PQ5NE16 218 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 ZC3H7AQ8IWR0 971 aaKnown RBP12.34□□□□□ -0.43
HDAC6-227ENST00000485102 FBXO15Q8NCQ5 510 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-227ENST00000485102 SKA2Q8WVK7 121 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-227ENST00000485102 MMABQ96EY8 250 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-227ENST00000485102 TRIM8Q9BZR9 551 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 DRC3Q9H069 523 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 SYNPO2LQ9H987 977 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 HOMER3Q9NSC5 361 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 PAK5Q9P286 719 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 PACSIN2Q9UNF0 486 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-227ENST00000485102 ZNF835Q9Y2P0 537 aa12.34□□□□□ -0.43
HDAC6-227ENST00000485102 KRT87PA6NCN2 255 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ZNF839A8K0R7 811 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ARHGEF33A8MVX0 844 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 H0YIG0 161 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 CES2O00748 559 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 CCNDBP1O95273 360 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 IFNB1P01574 187 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ESR1P03372 595 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 CELA2AP08217 269 aa12.33□□□□□ -0.44
HDAC6-227ENST00000485102 ANXA5P08758 320 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms