RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 MAP2K7O14733 419 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 TAPBPO15533 448 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 ZSCAN9O15535 394 aaPredicted RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 KLK10O43240 276 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 ZNF749O43361 778 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 ERLIN1O75477 346 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 WDR47O94967 919 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 NTRK1P04629 796 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 CDH1P12830 882 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 MTHFD2P13995 350 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 KRT15P19012 456 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 GNAZP19086 355 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 GDF5P43026 501 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 SLCO1A2P46721 670 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 CCR8P51685 355 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 ARSFP54793 590 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 RPS15AP62244 130 aaKnown RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 ABHD18Q0P651 414 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 GRM7Q14831 915 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 TGIF1Q15583 401 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 TECRLQ5HYJ1 363 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 YOD1Q5VVQ6 348 aaPredicted RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 RHBDD2Q6NTF9 364 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 TIPARPQ7Z3E1 657 aaKnown RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 SPACA3Q8IXA5 215 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 RIBC1Q8N443 379 aaPredicted RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 IL22RA1Q8N6P7 574 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 TTC29Q8NA56 475 aaPredicted RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 GALNT6Q8NCL4 622 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 ABHD11Q8NFV4 315 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 EPS8L3Q8TE67 593 aaKnown RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 NKD1Q969G9 470 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 LRFN5Q96NI6 719 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 OR2A5Q96R48 311 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 MRPL57Q9BQC6 102 aaKnown RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 TMEM79Q9BSE2 394 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 CD244Q9BZW8 370 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 SLC7A5P2Q9GIP4 190 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 SPRTNQ9H040 489 aaPredicted RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 MRPL46Q9H2W6 279 aaKnown RBP10.37□□□□□ -0.75
ATG4B-219ENST00000479941 PELI2Q9HAT8 420 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 PCMTD2Q9NV79 361 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 ZNF358Q9NW07 568 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 GPRC5BQ9NZH0 403 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 PADI1Q9ULC6 663 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 TMCO1Q9UM00 188 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 SRPK3Q9UPE1 567 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 HEATR5BQ9P2D3 2071 aa10.37□□□□□ -0.75
ATG4B-219ENST00000479941 SEC16AO15027 2179 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 KCNE1BA0A087WTH5 132 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 TEX51A0A1B0GUA7 166 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 TLDC2A0PJX2 215 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 FITM1A5D6W6 292 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 SMIM23A6NLE4 172 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 TXNDC9O14530 226 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 HAT1O14929 419 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 KLK8O60259 260 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 NRP2O60462 931 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 KLK3P07288 261 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 GSTA1P08263 222 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 GFAPP14136 432 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 HSPA7P48741 367 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 ALDH18A1P54886 795 aaKnown RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 UCNP55089 124 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 VSX2P58304 361 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 CSNK1G2P78368 415 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 TLE3Q04726 772 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 CDC16Q13042 620 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 FAM214AQ32MH5 1076 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 C18orf21Q32NC0 220 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 WASHC2DQ5SRD0 308 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 MANEAQ5SRI9 462 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 PRAMEF17Q5VTA0 474 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 BROXQ5VW32 411 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 FRMPD2BQ6IN97 320 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 METTL2BQ6P1Q9 378 aaKnown RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 LRRC70Q7Z2Q7 622 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 TBC1D19Q8N5T2 526 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 ZNF655Q8N720 491 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 SLC38A9Q8NBW4 561 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 OR4K1Q8NGD4 311 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 OR2W6PQ8NHA6 318 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 PROKR1Q8TCW9 393 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 UBTD2Q8WUN7 234 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 NEIL2Q969S2 332 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 RERGQ96A58 199 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 CLIP3Q96DZ5 547 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 SCYL1Q96KG9 808 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 CCNL2Q96S94 520 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 DPH2Q9BQC3 489 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 NDC1Q9BTX1 674 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 EFHD1Q9BUP0 239 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 SARGQ9BW04 601 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 FAM117AQ9C073 453 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 LHX9Q9NQ69 397 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 DNAJC11Q9NVH1 559 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 XPR1Q9UBH6 696 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 DCDC2Q9UHG0 476 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms