RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 COPS4Q9BT78 406 aa12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 KLF16Q9BXK1 252 aaPredicted RBP12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 ADGRE3Q9BY15 652 aa12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 C14orf119Q9NWQ9 140 aa12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 FBXL12Q9NXK8 326 aa12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 PPT2Q9UMR5 302 aa12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 SNX6Q9UNH7 406 aa12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 SAMHD1Q9Y3Z3 626 aaKnown RBP12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 UGT2A1Q9Y4X1 527 aa12.92□□□□□ -0.34
PDZRN3-208ENST00000479530 LOC730098B7Z3J9 87 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 TAF4O00268 1085 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 NRG2O14511 850 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 EIF2S1P05198 315 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 CSKP41240 450 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 NUDT6P53370 316 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 RHOAP61586 193 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 SP3Q02447 781 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 PROX2Q3B8N5 592 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 CACHD1Q5VU97 1274 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 TMEM150AQ86TG1 271 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 SDR16C5Q8N3Y7 309 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 SLC43A3Q8NBI5 491 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 IL17RDQ8NFM7 739 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 CENPOQ9BU64 300 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 KIF17Q9P2E2 1029 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 PCDHGA3Q9Y5H0 932 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 A8MV72 311 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 UPK3BL1B0FP48 263 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 UPK3BL2E5RIL1 263 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 CLDN7O95471 211 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 PTTG1O95997 202 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 RACK1P63244 317 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 CYP4F2P78329 520 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 NPRL3Q12980 569 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 TIGD6Q17RP2 521 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 NXNL2Q5VZ03 156 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 SLC8B1Q6J4K2 584 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 RFLNAQ6ZTI6 216 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 PIH1D2Q8WWB5 315 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 REXO4Q9GZR2 422 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 TM9SF3Q9HD45 589 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 DHRS7Q9Y394 339 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 BOLA1Q9Y3E2 137 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 PCDHGA6Q9Y5G7 932 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 TNPO3Q9Y5L0 923 aaKnown RBP12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 N6AMT1Q9Y5N5 214 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 HSPE1-MOB4S4R3N1 261 aa12.91□□□□□ -0.34
PDZRN3-208ENST00000479530 PLXNA4Q9HCM2 1894 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 UNC80Q8N2C7 3258 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 H7C4K7 107 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 RGS13O14921 159 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 FZD6O60353 706 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 DNAJA1P31689 397 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 PTGER3P43115 390 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 CTSKP43235 329 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ARHGDIAP52565 204 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 SMAD3P84022 425 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 TP53BP2Q13625 1128 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 CPSF6Q16630 551 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 NDUFA5Q16718 116 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 LRIF1Q5T3J3 769 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 TXNDC8Q6A555 127 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ZCCHC8Q6NZY4 707 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 DEFB128Q7Z7B8 93 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ZSWIM9Q86XI8 627 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 GATAD2AQ86YP4 633 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 NPAS4Q8IUM7 802 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ADGRG2Q8IZP9 1017 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ARL14EPQ8N8R7 260 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ADAMTS19Q8TE59 1207 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 KCNC2Q96PR1 638 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 EGFL8Q99944 293 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ACPTQ9BZG2 426 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 CCNB1IP1Q9NPC3 277 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 AASDHPPTQ9NRN7 309 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 TRPM5Q9NZQ8 1165 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 MBD1Q9UIS9 605 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 ERVW-1Q9UQF0 538 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 OR51B4Q9Y5P0 310 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 SAGE2PA6NJ88 616 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 HAT1O14929 419 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 TLL1O43897 1013 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 PRAMEF1O95521 474 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 IL1RNP18510 177 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 FPR1P21462 350 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 CAMK2GQ13555 558 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 PTRHD1Q6GMV3 140 aaKnown RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 PNCKQ6P2M8 343 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 TSPAN33Q86UF1 283 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 LILRB4Q8NHJ6 448 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 SDHCQ99643 169 aaPredicted RBP12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 KCNH6Q9H252 994 aa12.9□□□□□ -0.34
PDZRN3-208ENST00000479530 IL26Q9NPH9 171 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms