RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 NF1P21359 2839 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 ARHGEF33A8MVX0 844 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.471e-16■■■□□ 16.4
TDP2-204ENST00000478507 SLC19A2O60779 497 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 WFS1O76024 890 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 HEXBP07686 556 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 ERVK-10P10266 1014 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 ICAM2P13598 275 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 AGAP20933 346 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 CMPK1P30085 196 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 PMP22Q01453 160 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 RELAQ04206 551 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 TESK1Q15569 626 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 SYT16Q17RD7 645 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 H3F3CQ6NXT2 135 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 LRRC8BQ6P9F7 803 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 XKRXQ6PP77 449 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 SUSD1Q6UWL2 747 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 PEX26Q7Z412 305 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 PRUNE1Q86TP1 453 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 SHISA5Q8N114 240 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 UBL4BQ8N7F7 174 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 GSDMBQ8TAX9 411 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 MAGEC3Q8TD91 643 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 ADAMTS18Q8TE60 1221 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 MMABQ96EY8 250 aaPredicted RBP12.11□□□□□ -0.47
TDP2-204ENST00000478507 HES6Q96HZ4 224 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 TUBB6Q9BUF5 446 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 RAB6BQ9NRW1 208 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 IGSF5Q9NSI5 407 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 AMFRQ9UKV5 643 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 ZNF835Q9Y2P0 537 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 PCDHGB6Q9Y5F9 930 aa12.11□□□□□ -0.47
TDP2-204ENST00000478507 A0A0A6YYC8 382 aaPredicted RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 I3L1I5 382 aaPredicted RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 P2RX6O15547 441 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 VPS26AO75436 327 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 PSIP1O75475 530 aaKnown RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 FTCDO95954 541 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 PTMAP06454 111 aaKnown RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 APRTP07741 180 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 SNRPB2P08579 225 aaKnown RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 COX6B1P14854 86 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 ETS1P14921 441 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 EZRP15311 586 aaKnown RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 ADARP55265 1226 aaKnown RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 AP2B1P63010 937 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 CRADDP78560 199 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 PRDX1Q06830 199 aaKnown RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 FAM53BQ14153 422 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 ARHGAP19Q14CB8 494 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 C3AR1Q16581 482 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 TYSND1Q2T9J0 566 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 PCID2Q5JVF3 399 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 ABHD17BQ5VST6 288 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 Q6ZPB1 254 aaPredicted RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 NEK10Q6ZWH5 1172 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 ACBD4Q8NC06 268 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 MDS2Q8NDY4 140 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 PPHLN1Q8NEY8 458 aaKnown RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 OR9A1PQ8NGU1 263 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 THAP3Q8WTV1 239 aaPredicted RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 SKA2Q8WVK7 121 aaPredicted RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 SMPDL3AQ92484 453 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 LPGAT1Q92604 370 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 FOPNLQ96NB1 174 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 VN1R1Q9GZP7 353 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 DRC3Q9H069 523 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 MRPS30Q9NP92 439 aaKnown RBP12.1□□□□□ -0.47
TDP2-204ENST00000478507 STMN3Q9NZ72 180 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 MKL2Q9ULH7 1088 aa12.1□□□□□ -0.47
TDP2-204ENST00000478507 ASPDHA6ND91 283 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 E7EVH7 732 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 C19orf84I3L1E1 186 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 NIPSNAP2O75323 286 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 KRT38O76015 456 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 IFNB1P01574 187 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 CYC1P08574 325 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 C8orf89P0DMQ9 161 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 NMBRP28336 390 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 EIF3BP55884 814 aaKnown RBP12.09□□□□□ -0.47
TDP2-204ENST00000478507 MAT1AQ00266 395 aaKnown RBP12.09□□□□□ -0.47
TDP2-204ENST00000478507 ZNF33BQ06732 778 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 ANKRD20A4Q4UJ75 823 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 ICE2Q659A1 982 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 PLAG1Q6DJT9 500 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 LANCL3Q6ZV70 420 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 SYCE1Q8N0S2 351 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 NPAS2Q99743 824 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
TDP2-204ENST00000478507 TRIM5Q9C035 493 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 EIF2B3Q9NR50 452 aaKnown RBP12.09□□□□□ -0.47
TDP2-204ENST00000478507 GALPQ9UBC7 116 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 TAC3Q9UHF0 121 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 SH3BGRL2Q9UJC5 107 aa12.09□□□□□ -0.47
TDP2-204ENST00000478507 IGHV3-20A0A0C4DH32 117 aa12.08□□□□□ -0.48
TDP2-204ENST00000478507 E7ENX8 843 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms