RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 SLC22A11Q9NSA0 550 aa14.9□□□□□ -0.02
HMGA1-206ENST00000478214 IFT80Q9P2H3 777 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-206ENST00000478214 CTNNAL1Q9UBT7 734 aa14.9□□□□□ -0.02
HMGA1-206ENST00000478214 TCFL5Q9UL49 500 aa14.9□□□□□ -0.02
HMGA1-206ENST00000478214 POLHQ9Y253 713 aa14.9□□□□□ -0.02
HMGA1-206ENST00000478214 HYKKA2RU49 373 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 DSCR3O14972 297 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 MED26O95402 600 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 CCDC166P0CW27 439 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 EZRP15311 586 aaKnown RBP14.89□□□□□ -0.03
HMGA1-206ENST00000478214 NPPBP16860 134 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 CCND1P24385 295 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 PHBP35232 272 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 GMPRP36959 345 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 CCR10P46092 362 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 SLMAPQ14BN4 828 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 UGT8Q16880 541 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 PRTGQ2VWP7 1150 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 FAM214AQ32MH5 1076 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 YOD1Q5VVQ6 348 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-206ENST00000478214 CAPN13Q6MZZ7 669 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-206ENST00000478214 CMC1Q7Z7K0 106 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 ADAMTSL2Q86TH1 951 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 METTL27Q8N6F8 245 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-206ENST00000478214 CSNK1A1LQ8N752 337 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 LRRN4CLQ8ND94 238 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-206ENST00000478214 APOBEC4Q8WW27 367 aaKnown RBP14.89□□□□□ -0.03
HMGA1-206ENST00000478214 ATL1Q8WXF7 558 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 OR2A5Q96R48 311 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 DERL2Q9GZP9 239 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 TMEM184CQ9NVA4 438 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 GPN3Q9UHW5 284 aaPredicted RBP14.89□□□□□ -0.03
HMGA1-206ENST00000478214 OARD1Q9Y530 152 aa14.89□□□□□ -0.03
HMGA1-206ENST00000478214 CNOT3O75175 753 aaKnown RBP14.88□□□□□ -0.03
HMGA1-206ENST00000478214 KLF7O75840 302 aaPredicted RBP14.88□□□□□ -0.03
HMGA1-206ENST00000478214 C1QL1O75973 258 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 ACSL3O95573 720 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 RHOXF2BP0C7M4 288 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 CDH1P12830 882 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 HRH2P25021 359 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 POLE2P56282 527 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 FOXL2P58012 376 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 RAB10P61026 200 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 CSNK1G2P78368 415 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 RELAQ04206 551 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 HKDC1Q2TB90 917 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 FRA10AC1Q70Z53 315 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 TMEM151BQ8IW70 566 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 UBXN10Q96LJ8 280 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 C10orf90Q96M02 699 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 OR4K3Q96R72 315 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 CYTH2Q99418 400 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 EGFL8Q99944 293 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 C17orf62Q9BQA9 187 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 RHOXF2Q9BQY4 288 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 HAUS8Q9BT25 410 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 DHRS4Q9BTZ2 278 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 ACSS3Q9H6R3 686 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 NFU1Q9UMS0 254 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 RUVBL1Q9Y265 456 aaKnown RBP14.88□□□□□ -0.03
HMGA1-206ENST00000478214 KCNMB2Q9Y691 235 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 PCM1Q15154 2024 aa14.88□□□□□ -0.03
HMGA1-206ENST00000478214 CFAP46Q8IYW2 2715 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 P2RX6O15547 441 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 STATHP02808 62 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 ANXA5P08758 320 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 CD1DP15813 335 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 OR1D4P47884 311 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 CDKL1Q00532 357 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 BMPR2Q13873 1038 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 CSHL1Q14406 222 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 UAP1Q16222 522 aaPredicted RBP14.87□□□□□ -0.03
HMGA1-206ENST00000478214 MRPL14Q6P1L8 145 aaKnown RBP14.87□□□□□ -0.03
HMGA1-206ENST00000478214 COX15Q7KZN9 410 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 IFT20Q8IY31 132 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 ADAMTS17Q8TE56 1095 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 RERGQ96A58 199 aaPredicted RBP14.87□□□□□ -0.03
HMGA1-206ENST00000478214 CABS1Q96KC9 395 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 FUT8Q9BYC5 575 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 MAN2B2Q9Y2E5 1009 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 PADI2Q9Y2J8 665 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 PTRH2Q9Y3E5 179 aaKnown RBP14.87□□□□□ -0.03
HMGA1-206ENST00000478214 MAU2Q9Y6X3 613 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 FER1L5A0AVI2 2057 aa14.87□□□□□ -0.03
HMGA1-206ENST00000478214 ANKRD12Q6UB98 2062 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 BSNQ9UPA5 3926 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 TLN1Q9Y490 2541 aaKnown RBP14.86□□□□□ -0.03
HMGA1-206ENST00000478214 FEZF1A0PJY2 475 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 HMX2A2RU54 273 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 NCF1BA6NI72 391 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-206ENST00000478214 NCF1CA8MVU1 366 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-206ENST00000478214 ONECUT2O95948 504 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 SLC35E2BP0CK96 405 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 NCF1P14598 390 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-206ENST00000478214 CRABP2P29373 138 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 ATP6V0D1P61421 351 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 RPS15AP62244 130 aaKnown RBP14.86□□□□□ -0.03
HMGA1-206ENST00000478214 TGFBIQ15582 683 aa14.86□□□□□ -0.03
HMGA1-206ENST00000478214 OR4D1Q15615 310 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms