RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	CARS	P49589	748 aa	Known RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PMS2	P54278	862 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PNLIPRP1	P54315	467 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	FOXL2	P58012	376 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	FOXM1	Q08050	763 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	DLG1	Q12959	904 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	LY6D	Q14210	128 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	BBS9	Q3SYG4	887 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	FIGLA	Q6QHK4	219 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	OTOA	Q7RTW8	1153 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	SYTL1	Q8IYJ3	562 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	OR4N4	Q8N0Y3	316 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	OR4K1	Q8NGD4	311 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	FBXO25	Q8TCJ0	367 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	CALML6	Q8TD86	181 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	FAM136A	Q96C01	138 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	MED8	Q96G25	268 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	CFAP36	Q96G28	342 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	TTC1	Q99614	292 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	GPR22	Q99680	433 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PLCD4	Q9BRC7	762 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ADNP	Q9H2P0	1102 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	SPNS1	Q9H2V7	528 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	EPB41L4B	Q9H329	900 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	POPDC3	Q9HBV1	291 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	COPG2	Q9UBF2	871 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	TCRBV9S1A1T	A0A576	114 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	C4orf51	C9J302	202 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188		F8W8V4	182 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	TGFBR3L	H3BV60	316 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	SOCS6	O14544	535 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	HAT1	O14929	419 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	FOXS1	O43638	330 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PRAMEF4	O60810	478 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	CREG1	O75629	220 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	MT-ND3	P03897	115 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	EPOR	P19235	508 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	GCA	P28676	217 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	CASQ1	P31415	396 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	SLC6A12	P48065	614 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	POLE2	P56282	527 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ARL4C	P56559	192 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	TAS2R39	P59534	338 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	MGAT5	Q09328	741 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	HYAL2	Q12891	473 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PDIA2	Q13087	525 aa	Known RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	BIRC2	Q13490	618 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ZNF460	Q14592	562 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	NCF4	Q15080	339 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PRAMEF9	Q5VWM5	478 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ICE2	Q659A1	982 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	CPZ	Q66K79	652 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	FAM45BP	Q6NSW5	357 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	LINC00114	Q6XXX2	140 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PPP1R32	Q7Z5V6	425 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	BTLA	Q7Z6A9	289 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	SYVN1	Q86TM6	617 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	TAX1BP1	Q86VP1	789 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	AFAP1L2	Q8N4X5	818 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	C2orf73	Q8N5S3	287 aa	Predicted RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	AMER3	Q8N944	861 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PPFIBP2	Q8ND30	876 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	FAM45A	Q8TCE6	357 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PROKR1	Q8TCW9	393 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ANKRD7	Q92527	254 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ZUFSP	Q96AP4	578 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	RAD51AP1	Q96B01	352 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	UBXN10	Q96LJ8	280 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	MESP1	Q9BRJ9	268 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	TMEM79	Q9BSE2	394 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	LRRC1	Q9BTT6	524 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	GPR87	Q9BY21	358 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	NLN	Q9BYT8	704 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	TRIM55	Q9BYV6	548 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	LRRC4C	Q9HCJ2	640 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	DMGDH	Q9UI17	866 aa	Known RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	ANAPC5	Q9UJX4	755 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	PLCL2	Q9UPR0	1127 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	MRPS2	Q9Y399	296 aa	Known RBP	4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	MAD1L1	Q9Y6D9	718 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	COL6A6	A6NMZ7	2263 aa		4.05	□□□□□ -1.76
POLR2B-208	ENST00000478188	SETX	Q7Z333	2677 aa	Known RBP	4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	KCNE1B	A0A087WTH5	132 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	ISM1	B1AKI9	464 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	DSCR3	O14972	297 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	ZSCAN9	O15535	394 aa	Predicted RBP	4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	PIAS1	O75925	651 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	RPN2	P04844	631 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	GSTA2	P09210	222 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	GP1BB	P13224	206 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	COL8A1	P27658	744 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	SSTR1	P30872	391 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	TBPL1	P62380	186 aa		4.04	□□□□□ -1.76
POLR2B-208	ENST00000478188	CSNK1G2	P78368	415 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms