RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 DLG3Q92796 817 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 CXorf40BQ96DE9 158 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 CMTM5Q96DZ9 223 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 PTCD3Q96EY7 689 aaKnown RBP6.79□□□□□ -1.32
SHQ1-207ENST00000475558 WBP1Q96G27 269 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 PPP3R2Q96LZ3 170 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 C12orf66Q96MD2 445 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 INSM2Q96T92 566 aaPredicted RBP6.79□□□□□ -1.32
SHQ1-207ENST00000475558 SORT1Q99523 831 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 EFCAB11Q9BUY7 163 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 DUSP23Q9BVJ7 150 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 SGPP1Q9BX95 441 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 OSGEPL1Q9H4B0 414 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 EPB41L1Q9H4G0 881 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 NT5DC2Q9H857 520 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 NOL11Q9H8H0 719 aaKnown RBP6.79□□□□□ -1.32
SHQ1-207ENST00000475558 ACTR8Q9H981 624 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 UCK1Q9HA47 277 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 MEAF6Q9HAF1 191 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 FGF22Q9HCT0 170 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 NPHS2Q9NP85 383 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 CCDC177Q9NQR7 707 aaPredicted RBP6.79□□□□□ -1.32
SHQ1-207ENST00000475558 POT1Q9NUX5 634 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 EVA1BQ9NVM1 165 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 AHSPQ9NZD4 102 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 STOX2Q9P2F5 926 aaPredicted RBP6.79□□□□□ -1.32
SHQ1-207ENST00000475558 GULP1Q9UBP9 304 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 SLC23A2Q9UGH3 650 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 TRPS1Q9UHF7 1281 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 ADAMTS6Q9UKP5 1117 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 DOLKQ9UPQ8 538 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 WBP11Q9Y2W2 641 aaKnown RBP6.79□□□□□ -1.32
SHQ1-207ENST00000475558 PCDHB11Q9Y5F2 797 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 SPTA1P02549 2419 aa6.79□□□□□ -1.32
SHQ1-207ENST00000475558 MUC22E2RYF6 1773 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 A0A1W2PR77 199 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ARHGEF33A8MVX0 844 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 E7ENX8 843 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 NPIPB8E9PQR5 432 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 H0YIV9 168 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ERVH48-1M5A8F1 160 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 FOXE1O00358 373 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 SIX3O95343 332 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 SLC16A8O95907 504 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 FUCA1P04066 466 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ANXA6P08133 673 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 C1GALT1C1LP0DN25 315 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ALPPL2P10696 532 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 KITP10721 976 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ERGP11308 486 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 MTHFD1P11586 935 aaKnown RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 CD46P15529 392 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ARL1P40616 181 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ACTR1BP42025 376 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 PREPP48147 710 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 HSPA7P48741 367 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ACADVLP49748 655 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 IDH3AP50213 366 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ATP4BP51164 291 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ARFIP1P53367 373 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 CDH13P55290 713 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ACTR1AP61163 376 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 RHDQ02161 417 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 IRF8Q02556 426 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TAP2Q03519 686 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 BIRC2Q13490 618 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 E2F2Q14209 437 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 FZD2Q14332 565 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 KIR2DS3Q14952 304 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 RPS6KA2Q15349 733 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 MAPRE2Q15555 327 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 RPE65Q16518 533 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 GSTA3Q16772 222 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ALG11Q2TAA5 492 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 UGT3A2Q3SY77 523 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 KANK2Q63ZY3 851 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 FAM91A1Q658Y4 838 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ATG9BQ674R7 924 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 OGFOD3Q6PK18 319 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 C6orf89Q6UWU4 347 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 LAYNQ6UX15 382 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 RD3Q7Z3Z2 195 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TRIM46Q7Z4K8 759 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TRIM48Q8IWZ4 208 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 PHACTR4Q8IZ21 702 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 CPSF7Q8N684 471 aaKnown RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 EID2Q8N6I1 236 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ZNF781Q8N8C0 355 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 SNX31Q8N9S9 440 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 OR13H1Q8NG92 308 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 OR2L8Q8NGY9 312 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 SAP25Q8TEE9 199 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 AGAP11Q8TF27 550 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TSPEARQ8WU66 669 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 C10orf82Q8WW14 230 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 EXT2Q93063 718 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TSACCQ96A04 125 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ZUFSPQ96AP4 578 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 WDR34Q96EX3 536 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 MAELQ96JY0 434 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms