RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 MTERF1Q99551 399 aaKnown RBP13.23□□□□□ -0.29
TRAF4-210ENST00000475329 PITHD1Q9GZP4 211 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-210ENST00000475329 EFCAB1Q9HAE3 211 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 DMRT3Q9NQL9 472 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 POT1Q9NUX5 634 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 CUEDC1Q9NWM3 386 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-210ENST00000475329 OR6C2Q9NZP2 312 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 VPS29Q9UBQ0 182 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 TMED5Q9Y3A6 229 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 TSC22D4Q9Y3Q8 395 aa13.23□□□□□ -0.29
TRAF4-210ENST00000475329 TECTAO75443 2155 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 TRBV23OR9-2A0A075B6M9 112 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 FAM234BA2RU67 622 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 MAGEB17A8MXT2 336 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 FOXE1O00358 373 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-210ENST00000475329 VILLO15195 856 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 SLC22A3O75751 556 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 VIPP01282 170 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 CSF2P04141 144 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 CHRM5P08912 532 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-210ENST00000475329 G6PDP11413 515 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 PRPS2P11908 318 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 TDGF1P13385 188 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 PCSK2P16519 638 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 SERPINB1P30740 379 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 PGM1P36871 562 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 PIK3CBP42338 1070 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 C21orf59P57076 290 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 KCNK10P57789 538 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 NXPH1P58417 271 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 UFM1P61960 85 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 ABATP80404 500 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 SLC25A3Q00325 362 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 REEP5Q00765 189 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 MEF2AQ02078 507 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-210ENST00000475329 PRDX1Q06830 199 aaKnown RBP13.22□□□□□ -0.29
TRAF4-210ENST00000475329 ART3Q13508 389 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 ELOCQ15369 112 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 MMEL1Q495T6 779 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 TMIGD1Q6UXZ0 262 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 FAM129CQ86XR2 697 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 FUNDC1Q8IVP5 155 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 LIX1Q8N485 282 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 RNF175Q8N4F7 328 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 KYQ8NBH2 561 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 OR2A1Q8NGT9 310 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 TSPEARQ8WU66 669 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 UTP4Q969X6 686 aaKnown RBP13.22□□□□□ -0.29
TRAF4-210ENST00000475329 ZBTB18Q99592 522 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 MRPL1Q9BYD6 325 aaKnown RBP13.22□□□□□ -0.29
TRAF4-210ENST00000475329 SPNS1Q9H2V7 528 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 MMADHCQ9H3L0 296 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-210ENST00000475329 SRMSQ9H3Y6 488 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 NT5DC2Q9H857 520 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 SLC40A1Q9NP59 571 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 NMRK1Q9NWW6 199 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 CPNE7Q9UBL6 633 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 ADGRE2Q9UHX3 823 aa13.22□□□□□ -0.29
TRAF4-210ENST00000475329 MDC1Q14676 2089 aaKnown RBP13.22□□□□□ -0.29
TRAF4-210ENST00000475329 MRASO14807 208 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 ANGPT2O15123 496 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 PRICKLE3O43900 615 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 NRP2O60462 931 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 AMD1P17707 334 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 JAK1P23458 1154 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 CMPK1P30085 196 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 PEBP1P30086 187 aaKnown RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 AFF3P51826 1226 aaKnown RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 POLR2JP52435 117 aaKnown RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 RPS13P62277 151 aaKnown RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 UBE2IP63279 158 aaKnown RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 ACSM2AQ08AH3 577 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 C1orf61Q13536 156 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 RCAN2Q14206 197 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 GPR18Q14330 331 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 KIAA0040Q15053 153 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 TEAD4Q15561 434 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 ACSM2BQ68CK6 577 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 ADNP2Q6IQ32 1131 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 BLOC1S3Q6QNY0 202 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 GKN2Q86XP6 184 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 FAM46DQ8NEK8 389 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 OR4E2Q8NGC2 313 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 OR4K1Q8NGD4 311 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 SLC37A2Q8TED4 501 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 ZDHHC1Q8WTX9 485 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 SPDL1Q96EA4 605 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 APIPQ96GX9 242 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 FCRL1Q96LA6 429 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 APOLD1Q96LR9 279 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 NPAS2Q99743 824 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 CAAP1Q9H8G2 361 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 MRPS30Q9NP92 439 aaKnown RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 SPASTQ9UBP0 616 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 PPT2Q9UMR5 302 aa13.21□□□□□ -0.29
TRAF4-210ENST00000475329 RUVBL1Q9Y265 456 aaKnown RBP13.21□□□□□ -0.29
TRAF4-210ENST00000475329 NDUFAF1Q9Y375 327 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms