RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 GPR3P46089 330 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CAPZBP47756 277 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 INHBCP55103 352 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 FOXA1P55317 472 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 IRX1P78414 480 aaPredicted RBP9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 GPLD1P80108 840 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CCDC6Q16204 474 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC5A12Q1EHB4 618 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC9B1Q4ZJI4 515 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CATSPEREQ5SY80 951 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 VWA5B1Q5TIE3 1220 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CACHD1Q5VU97 1274 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 METTL21CQ5VZV1 264 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 SPESP1Q6UW49 350 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 SCIMPQ6UWF3 145 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 SLCO4C1Q6ZQN7 724 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CCDC121Q6ZUS5 278 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 PARP9Q8IXQ6 854 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 LRRC56Q8IYG6 542 aaPredicted RBP9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 ADGRF3Q8IZF5 1079 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 FAM9CQ8IZT9 166 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 EID2Q8N6I1 236 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 LMNTD1Q8N9Z9 388 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 FNDC5Q8NAU1 212 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 GPR156Q8NFN8 814 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 ACTRT2Q8TDY3 377 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 STON2Q8WXE9 905 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 NCSTNQ92542 709 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 PRAP1Q96NZ9 151 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 CCDC3Q9BQI4 270 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 DPH7Q9BTV6 452 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 TBC1D10AQ9BXI6 508 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 WDR55Q9H6Y2 383 aaPredicted RBP9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 BRF2Q9HAW0 419 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 IRAK4Q9NWZ3 460 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 SOHLH2Q9NX45 425 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC12A4Q9UP95 1085 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 EIF3LQ9Y262 564 aaKnown RBP9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 BDP1A6H8Y1 2624 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 RALGAPA1Q6GYQ0 2036 aa9.89□□□□□ -0.83
PRPF38A-202ENST00000474048 ATP6AP2A0A1C7CYW4 349 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 TRBC2A0A5B9 178 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 ARHGAP10A1A4S6 786 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 URADA6NGE7 173 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 BTN3A3O00478 584 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 FLRT2O43155 660 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 PCDHGA12O60330 932 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 FOXD2O60548 495 aaPredicted RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 PEX11AO75192 247 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SEC22BO75396 215 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 ATP6AP2O75787 350 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 PDYNP01213 254 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SERPINA6P08185 405 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC35G6P0C7Q6 338 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 ZNF883P0CG24 379 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 PCSK2P16519 638 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 RPS15AP62244 130 aaKnown RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 REEP5Q00765 189 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 BNC1Q01954 994 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 MEF2AQ02078 507 aaPredicted RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 RGS1Q08116 209 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 PCDH1Q08174 1060 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 TGM3Q08188 693 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 ACSM2AQ08AH3 577 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 ABRAXAS2Q15018 415 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 AMZ1Q400G9 498 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 AASDHQ4L235 1098 aaPredicted RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 ACSM2BQ68CK6 577 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 PRR23CQ6ZRP0 262 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 CHSY3Q70JA7 882 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SPATA19Q7Z5L4 167 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 PLXDC1Q8IUK5 500 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC35F3Q8IY50 421 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC25A45Q8N413 288 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 Q8N9G6 341 aaPredicted RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 TRPV3Q8NET8 790 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 OR2A1Q8NGT9 310 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SAP25Q8TEE9 199 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 ERP27Q96DN0 273 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 WDR34Q96EX3 536 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 HBEGFQ99075 208 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 CD180Q99467 661 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 MTERF1Q99551 399 aaKnown RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SERPINI1Q99574 410 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 ZBTB18Q99592 522 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 EBF4Q9BQW3 602 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 LRFN3Q9BTN0 628 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 MENTQ9BUN1 341 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 LRTM1Q9HBL6 345 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 C11orf16Q9NQ32 467 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 CUEDC1Q9NWM3 386 aaPredicted RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 GEMIN8Q9NWZ8 242 aaKnown RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 SPHK1Q9NYA1 384 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 AHSPQ9NZD4 102 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 NOP53Q9NZM5 478 aaKnown RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 RNF215Q9Y6U7 377 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 CAPN7Q9Y6W3 813 aa9.88□□□□□ -0.83
PRPF38A-202ENST00000474048 A0A088AWK7 358 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms