RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SPRTNQ9H040 489 aaPredicted RBP19.91■□□□□ 0.78
TOP3A-204ENST00000472959 MRPL46Q9H2W6 279 aaKnown RBP19.91■□□□□ 0.78
TOP3A-204ENST00000472959 DNAJC11Q9NVH1 559 aa19.91■□□□□ 0.78
TOP3A-204ENST00000472959 IRAK4Q9NWZ3 460 aa19.91■□□□□ 0.78
TOP3A-204ENST00000472959 GPRC5BQ9NZH0 403 aa19.91■□□□□ 0.78
TOP3A-204ENST00000472959 DCDC2Q9UHG0 476 aa19.91■□□□□ 0.78
TOP3A-204ENST00000472959 LGALS13Q9UHV8 139 aa19.91■□□□□ 0.78
TOP3A-204ENST00000472959 SH2B3Q9UQQ2 575 aa19.91■□□□□ 0.78
TOP3A-204ENST00000472959 ACACAQ13085 2346 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 KCNE1BA0A087WTH5 132 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 A0A1W2PPM1 405 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 GOLGA8RI6L899 631 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 ZSCAN9O15535 394 aaPredicted RBP19.9■□□□□ 0.78
TOP3A-204ENST00000472959 NRP2O60462 931 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 RAD1O60671 282 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 GFAPP14136 432 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 GNAZP19086 355 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 HSPA7P48741 367 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 RPS15AP62244 130 aaKnown RBP19.9■□□□□ 0.78
TOP3A-204ENST00000472959 CDC16Q13042 620 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 CLN3Q13286 438 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 YOD1Q5VVQ6 348 aaPredicted RBP19.9■□□□□ 0.78
TOP3A-204ENST00000472959 LRRC69Q6ZNQ3 347 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 LRRC70Q7Z2Q7 622 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 LRFN5Q96NI6 719 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 OR2A5Q96R48 311 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 ACTR5Q9H9F9 607 aaPredicted RBP19.9■□□□□ 0.78
TOP3A-204ENST00000472959 PELI2Q9HAT8 420 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 XPR1Q9UBH6 696 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 ZMIZ1Q9ULJ6 1067 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 SRPK3Q9UPE1 567 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 FRYQ5TBA9 3013 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 AHCTF1Q8WYP5 2266 aa19.9■□□□□ 0.78
TOP3A-204ENST00000472959 FREM2Q5SZK8 3169 aa19.89■□□□□ 0.78
TOP3A-204ENST00000472959 A0A087WV48 116 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 HAT1O14929 419 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 ZNF749O43361 778 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 NTRK1P04629 796 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 CCNYL3P0C7X3 344 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 VSX2P58304 361 aaPredicted RBP19.89■□□□□ 0.77
TOP3A-204ENST00000472959 ADAMTS20P59510 1910 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 GRM7Q14831 915 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 SETDB1Q15047 1291 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 PDK4Q16654 411 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 PFKFB4Q16877 469 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 FRMPD2BQ6IN97 320 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 METTL2BQ6P1Q9 378 aaKnown RBP19.89■□□□□ 0.77
TOP3A-204ENST00000472959 NXPE4Q6UWF7 544 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 SH2D5Q6ZV89 423 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 TIPARPQ7Z3E1 657 aaKnown RBP19.89■□□□□ 0.77
TOP3A-204ENST00000472959 CACNA2D3Q8IZS8 1091 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 TBC1D19Q8N5T2 526 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 GALNT6Q8NCL4 622 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 NKD1Q969G9 470 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 RERGQ96A58 199 aaPredicted RBP19.89■□□□□ 0.77
TOP3A-204ENST00000472959 NAF1Q96HR8 494 aaKnown RBP19.89■□□□□ 0.77
TOP3A-204ENST00000472959 DCBLD2Q96PD2 775 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 NDC1Q9BTX1 674 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 SLC7A5P2Q9GIP4 190 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 CPSF2Q9P2I0 782 aaKnown RBP19.89■□□□□ 0.77
TOP3A-204ENST00000472959 PADI1Q9ULC6 663 aa19.89■□□□□ 0.77
TOP3A-204ENST00000472959 TNPO3Q9Y5L0 923 aaKnown RBP19.89■□□□□ 0.77
TOP3A-204ENST00000472959 LOC105369274A0A096LPK9 316 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 LOC102723532A0A0G2JNH3 316 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 FITM1A5D6W6 292 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 H0YGG7 62 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 TXNDC9O14530 226 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 KLK10O43240 276 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 CTIFO43310 598 aaKnown RBP19.88■□□□□ 0.77
TOP3A-204ENST00000472959 CCNT2O60583 730 aaKnown RBP19.88■□□□□ 0.77
TOP3A-204ENST00000472959 SMIM24O75264 130 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 KLK3P07288 261 aaPredicted RBP19.88■□□□□ 0.77
TOP3A-204ENST00000472959 CCT5P48643 541 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 ARSFP54793 590 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 ARF3P61204 181 aaPredicted RBP19.88■□□□□ 0.77
TOP3A-204ENST00000472959 WASHC2DQ5SRD0 308 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 PRAMEF17Q5VTA0 474 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 IQCKQ8N0W5 287 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 OR4N4Q8N0Y3 316 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 ZNF655Q8N720 491 aaPredicted RBP19.88■□□□□ 0.77
TOP3A-204ENST00000472959 TTC29Q8NA56 475 aaPredicted RBP19.88■□□□□ 0.77
TOP3A-204ENST00000472959 HNRNPLLQ8WVV9 542 aaKnown RBP19.88■□□□□ 0.77
TOP3A-204ENST00000472959 ESAMQ96AP7 390 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 CLIP3Q96DZ5 547 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 SARGQ9BW04 601 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 TMEM216Q9P0N5 145 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 OPTCQ9UBM4 332 aa19.88■□□□□ 0.77
TOP3A-204ENST00000472959 TRBC2A0A5B9 178 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 K7EPI3 171 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 CLGNO14967 610 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 GLRA3O75311 464 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 H2AFYO75367 372 aaKnown RBP19.87■□□□□ 0.77
TOP3A-204ENST00000472959 CTSBP07858 339 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 CXCR2P25025 360 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 CRHR1P34998 444 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 AGTR2P50052 363 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 EMP3P54852 163 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 ABHD18Q0P651 414 aa19.87■□□□□ 0.77
TOP3A-204ENST00000472959 PCBP2Q15366 365 aaKnown RBP eCLIP19.87■□□□□ 0.77
TOP3A-204ENST00000472959 TGIF1Q15583 401 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms