RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 MBOAT1Q6ZNC8 495 aa17.96■□□□□ 0.47
COMMD1-207ENST00000471704 TTC29Q8NA56 475 aaPredicted RBP17.96■□□□□ 0.47
COMMD1-207ENST00000471704 TRIM31Q9BZY9 425 aa17.96■□□□□ 0.47
COMMD1-207ENST00000471704 LRRC4CQ9HCJ2 640 aa17.96■□□□□ 0.47
COMMD1-207ENST00000471704 ATP13A2Q9NQ11 1180 aa17.96■□□□□ 0.47
COMMD1-207ENST00000471704 CUEDC1Q9NWM3 386 aaPredicted RBP17.96■□□□□ 0.47
COMMD1-207ENST00000471704 CTSFQ9UBX1 484 aa17.96■□□□□ 0.47
COMMD1-207ENST00000471704 ZC3H7BQ9UGR2 993 aaKnown RBP17.96■□□□□ 0.47
COMMD1-207ENST00000471704 TRMT6Q9UJA5 497 aaKnown RBP17.96■□□□□ 0.47
COMMD1-207ENST00000471704 B3GNT3Q9Y2A9 372 aa17.96■□□□□ 0.47
COMMD1-207ENST00000471704 DOPEY1Q5JWR5 2465 aa17.96■□□□□ 0.47
COMMD1-207ENST00000471704 POLEQ07864 2286 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 HYKKA2RU49 373 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 H0YGG7 62 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 SMAPO00193 183 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 ZBTB14O43829 449 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 SEMA7AO75326 666 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 AGFG2O95081 481 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 TSPAN12O95859 305 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 ALPPP05187 535 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 PIM1P11309 404 aaPredicted RBP17.95■□□□□ 0.46
COMMD1-207ENST00000471704 HSD17B2P37059 387 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 RPL21P46778 160 aaKnown RBP17.95■□□□□ 0.46
COMMD1-207ENST00000471704 ARF3P61204 181 aaPredicted RBP17.95■□□□□ 0.46
COMMD1-207ENST00000471704 KIAA0408Q6ZU52 694 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 GALNT7Q86SF2 657 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 ANKMY2Q8IV38 441 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 PDIK1LQ8N165 341 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 C17orf53Q8N3J3 647 aaPredicted RBP17.95■□□□□ 0.46
COMMD1-207ENST00000471704 ARHGEF39Q8N4T4 335 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 ANP32BQ92688 251 aaKnown RBP17.95■□□□□ 0.46
COMMD1-207ENST00000471704 C19orf60Q96EN9 201 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 SNF8Q96H20 258 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 RUNDC3BQ96NL0 473 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 KRT12Q99456 494 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 MESP1Q9BRJ9 268 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 ABCF3Q9NUQ8 709 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 SH2B3Q9UQQ2 575 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 PDE10AQ9Y233 779 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 MAU2Q9Y6X3 613 aa17.95■□□□□ 0.46
COMMD1-207ENST00000471704 VSTM2BA6NLU5 285 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 HAT1O14929 419 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 IPO13O94829 963 aaKnown RBP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 EIF2S1P05198 315 aaKnown RBP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 AIMP2Q13155 320 aaKnown RBP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 HIF1AQ16665 826 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 ZXDCQ2QGD7 858 aaPredicted RBP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 HKDC1Q2TB90 917 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 SHISA6Q6ZSJ9 500 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 SNRNP40Q96DI7 357 aaKnown RBP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 OR2A5Q96R48 311 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 BARD1Q99728 777 aaKnown RBP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 OLFM1Q99784 485 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 SOX17Q9H6I2 414 aaPredicted RBP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 ZBTB20Q9HC78 741 aaPredicted RBP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 TAS2R13Q9NYV9 303 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 FBXL4Q9UKA2 621 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 PSAT1Q9Y617 370 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 HS3ST3B1Q9Y662 390 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.94■□□□□ 0.46
COMMD1-207ENST00000471704 NOTCH2Q04721 2471 aa17.94■□□□□ 0.46
COMMD1-207ENST00000471704 CENPEQ02224 2701 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 ZNF839A8K0R7 811 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 E7ESA3 106 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 SOCS6O14544 535 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 P2RX6O15547 441 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 ALOX12BO75342 701 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 RNF224P0DH78 156 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 FDXRP22570 491 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 PAFAH1B1P43034 410 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 TBPL1P62380 186 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 MRPL49Q13405 166 aaKnown RBP17.93■□□□□ 0.46
COMMD1-207ENST00000471704 NAA25Q14CX7 972 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 PHKG1Q16816 387 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 FAM214AQ32MH5 1076 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 HECTD2Q5U5R9 776 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 UGT3A1Q6NUS8 523 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 KIRREL2Q6UWL6 708 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 Q6ZS92 163 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 PLD3Q8IV08 490 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 IQCKQ8N0W5 287 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 SSC4DQ8WTU2 575 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 LRRC39Q96DD0 335 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 LINGO1Q96FE5 620 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 SLC29A3Q9BZD2 475 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 PPANQ9NQ55 473 aaKnown RBP17.93■□□□□ 0.46
COMMD1-207ENST00000471704 IKZF3Q9UKT9 509 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 RUVBL1Q9Y265 456 aaKnown RBP17.93■□□□□ 0.46
COMMD1-207ENST00000471704 SNX24Q9Y343 169 aa17.93■□□□□ 0.46
COMMD1-207ENST00000471704 EFCAB8A8MWE9 144 aa17.92■□□□□ 0.46
COMMD1-207ENST00000471704 CCNDBP1O95273 360 aa17.92■□□□□ 0.46
COMMD1-207ENST00000471704 CBX6O95503 412 aa17.92■□□□□ 0.46
COMMD1-207ENST00000471704 EZRP15311 586 aaKnown RBP17.92■□□□□ 0.46
COMMD1-207ENST00000471704 ARL4CP56559 192 aa17.92■□□□□ 0.46
COMMD1-207ENST00000471704 CBLBQ13191 982 aa17.92■□□□□ 0.46
COMMD1-207ENST00000471704 FRG1Q14331 258 aaKnown RBP17.92■□□□□ 0.46
COMMD1-207ENST00000471704 EIF2S3LQ2VIR3 472 aaKnown RBP17.92■□□□□ 0.46
COMMD1-207ENST00000471704 LRRC8EQ6NSJ5 796 aa17.92■□□□□ 0.46
COMMD1-207ENST00000471704 TMEM207Q6UWW9 146 aa17.92■□□□□ 0.46
COMMD1-207ENST00000471704 CISD2Q8N5K1 135 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms