RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 NAV2Q8IVL1 2488 aa12.63□□□□□ -0.39
CPSF4-210ENST00000469897 USP9XQ93008 2570 aaPredicted RBP12.63□□□□□ -0.39
CPSF4-210ENST00000469897 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 ZNF839A8K0R7 811 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 H7BY64 318 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 SMAPO00193 183 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 LRRTM2O43300 516 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 ZBTB14O43829 449 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 HAUS5O94927 633 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 STATHP02808 62 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 ANXA5P08758 320 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 PRR35P0CG20 571 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 COX6A1P12074 109 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 MLNP12872 115 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 SNRPNP63162 240 aaKnown RBP12.62□□□□□ -0.39
CPSF4-210ENST00000469897 MAT1AQ00266 395 aaKnown RBP12.62□□□□□ -0.39
CPSF4-210ENST00000469897 EEF1A2Q05639 463 aaKnown RBP12.62□□□□□ -0.39
CPSF4-210ENST00000469897 DSG2Q14126 1118 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 TTLL9Q3SXZ7 439 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 THEMIS2Q5TEJ8 643 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 NEK10Q6ZWH5 1172 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 LRRC56Q8IYG6 542 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-210ENST00000469897 SIRT6Q8N6T7 355 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 AMER3Q8N944 861 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 MCUQ8NE86 351 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 BRIX1Q8TDN6 353 aaKnown RBP12.62□□□□□ -0.39
CPSF4-210ENST00000469897 RERGQ96A58 199 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-210ENST00000469897 PRAP1Q96NZ9 151 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 CCDC68Q9H2F9 335 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 C20orf96Q9NUD7 363 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-210ENST00000469897 KLHL42Q9P2K6 505 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 DHRS7Q9Y394 339 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 MAD1L1Q9Y6D9 718 aa12.62□□□□□ -0.39
CPSF4-210ENST00000469897 IGHV1-45A0A0A0MS14 117 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 GFYI3L273 518 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 HAT1O14929 419 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 PRPF4O43172 522 aaKnown RBP eCLIP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 KIF5CO60282 957 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 PHF2O75151 1096 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 WFS1O76024 890 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 CCNDBP1O95273 360 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 F10P00742 488 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 SERPINA7P05543 415 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 CELA2AP08217 269 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 MPC1LP0DKB6 136 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 COILP38432 576 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 DCTP40126 519 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 ARG2P78540 354 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 ABATP80404 500 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 GARNL3Q5VVW2 1013 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 ARMC3Q5W041 872 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 B3GNTL1Q67FW5 361 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 CCDC137Q6PK04 289 aaKnown RBP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 UBE2R2Q712K3 238 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 SHISA5Q8N114 240 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 AGGF1Q8N302 714 aaeCLIP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 RASGEF1CQ8N431 466 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 ARHGEF39Q8N4T4 335 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 FBXO15Q8NCQ5 510 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 COG1Q8WTW3 980 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 KCNJ9Q92806 393 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 MVB12AQ96EY5 273 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 MAGEB10Q96LZ2 347 aaPredicted RBP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 SERPINB12Q96P63 405 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 GPR21Q99679 349 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 MACROD1Q9BQ69 325 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 TGIF2Q9GZN2 237 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 MKL2Q9ULH7 1088 aa12.61□□□□□ -0.39
CPSF4-210ENST00000469897 MRPS2Q9Y399 296 aaKnown RBP12.61□□□□□ -0.39
CPSF4-210ENST00000469897 NBPF19A0A087WUL8 3843 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 DYTNA2CJ06 578 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 E2F3O00716 465 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 TXNDC9O14530 226 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 P2RX6O15547 441 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 EDN3P14138 238 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 EZRP15311 586 aaKnown RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 SKIV2L2P42285 1042 aaKnown RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 SLC1A2P43004 574 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 EFNA3P52797 238 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 CCZ1BP86790 482 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 CCZ1P86791 482 aaPredicted RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 MPP1Q00013 466 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 RELAQ04206 551 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 SRSF11Q05519 484 aaKnown RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 LONRF1Q17RB8 773 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 HSP90AA5PQ58FG0 334 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 RPUSD3Q6P087 351 aaKnown RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 FAM180AQ6UWF9 173 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 PIWIL4Q7Z3Z4 852 aaKnown RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 CPNE9Q8IYJ1 553 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 OR9A4Q8NGU2 314 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 HAS2Q92819 552 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 PBKQ96KB5 322 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 SIGLEC10Q96LC7 697 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 EBNA1BP2Q99848 306 aaKnown RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 DRC3Q9H069 523 aa12.6□□□□□ -0.39
CPSF4-210ENST00000469897 XAB2Q9HCS7 855 aaKnown RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 MKKSQ9NPJ1 570 aaPredicted RBP12.6□□□□□ -0.39
CPSF4-210ENST00000469897 IARS2Q9NSE4 1012 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms