RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 AGTRAPQ6RW13 159 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 LCTLQ6UWM7 567 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 LRIG3Q6UXM1 1119 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 CEACAM20Q6UY09 585 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 NAPRTQ6XQN6 538 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ZNF517Q6ZMY9 492 aaPredicted RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 SH2D5Q6ZV89 423 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 MICALCLQ6ZW33 695 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 RAPH1Q70E73 1250 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 USP53Q70EK8 1073 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 RAB11FIP2Q7L804 512 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 TMPRSS9Q7Z410 1059 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 B3GNT8Q7Z7M8 397 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 SYT9Q86SS6 491 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 PPP1R3BQ86XI6 285 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 SYTL1Q8IYJ3 562 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 CENPLQ8N0S6 344 aaPredicted RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 IQCKQ8N0W5 287 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 C19orf47Q8N9M1 422 aaKnown RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 PDPRQ8NCN5 879 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 OR2L3Q8NG85 312 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 OR56A3Q8NH54 315 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 MZB1Q8WU39 189 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 UBTD2Q8WUN7 234 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ANKRD49Q8WVL7 239 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 UBLCP1Q8WVY7 318 aaPredicted RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 DLG3Q92796 817 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 GATA6Q92908 595 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 NACC2Q96BF6 587 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ALKBH8Q96BT7 664 aaKnown RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 FAM136AQ96C01 138 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 RHBDF1Q96CC6 855 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 CCDC126Q96EE4 140 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 PGM2Q96G03 612 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ATXN7L3BQ96GX2 97 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 PRR11Q96HE9 360 aaPredicted RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 CCDC74BQ96LY2 380 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 MAGEB10Q96LZ2 347 aaPredicted RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 TSNARE1Q96NA8 513 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ZNF285Q96NJ3 590 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 GPR78Q96P69 363 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 TGM7Q96PF1 710 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 TRAPPC9Q96Q05 1148 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 TAAR9Q96RI9 348 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ATOH8Q96SQ7 321 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 PKP4Q99569 1192 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 MAP3K3Q99759 626 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 DPH2Q9BQC3 489 aaPredicted RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 MRPL57Q9BQC6 102 aaKnown RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 C1QTNF3Q9BXJ4 246 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 MRPL46Q9H2W6 279 aaKnown RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 FANCEQ9HB96 536 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 PDE7BQ9NP56 450 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 SSU72Q9NP77 194 aaKnown RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ASCL3Q9NQ33 180 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 CCDC177Q9NQR7 707 aaPredicted RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 FGF21Q9NSA1 209 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 IGSF5Q9NSI5 407 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ARL15Q9NXU5 204 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ACTR10Q9NZ32 417 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 NUDT4Q9NZJ9 180 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 STOX2Q9P2F5 926 aaPredicted RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 COPG2Q9UBF2 871 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 FAM8A1Q9UBU6 413 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 PTBP2Q9UKA9 531 aaKnown RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 SNX7Q9UNH6 387 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 SRPK3Q9UPE1 567 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 TSC22D4Q9Y3Q8 395 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 LOXL2Q9Y4K0 774 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 TNPO3Q9Y5L0 923 aaKnown RBP3.39□□□□□ -1.87
TRIM59-202ENST00000468542 ACTL7BQ9Y614 415 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 NFS1Q9Y697 457 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 KCNE2Q9Y6J6 123 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 AP1M2Q9Y6Q5 423 aa3.39□□□□□ -1.87
TRIM59-202ENST00000468542 A0A087WV48 116 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 IGHV5-51A0A0C4DH38 117 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 PRAMEF33A0A0G2JMD5 474 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 A0A1W2PNU3 283 aaPredicted RBP3.38□□□□□ -1.87
TRIM59-202ENST00000468542 MED19A0JLT2 244 aaPredicted RBP3.38□□□□□ -1.87
TRIM59-202ENST00000468542 NPEPPSL1A6NEC2 478 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 TRABD2BA6NFA1 517 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 TRIM49D1C9J1S8 452 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 H3BMH7 237 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 STMND1H3BQB6 276 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 CDC7O00311 574 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 ZSCAN9O15535 394 aaPredicted RBP3.38□□□□□ -1.87
TRIM59-202ENST00000468542 PHGDHO43175 533 aaKnown RBP3.38□□□□□ -1.87
TRIM59-202ENST00000468542 CPNE3O75131 537 aaKnown RBP3.38□□□□□ -1.87
TRIM59-202ENST00000468542 GLRA3O75311 464 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 KATNA1O75449 491 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 RFPL1O75677 317 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 STK16O75716 305 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 PIAS1O75925 651 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 SNUPNO95149 360 aaKnown RBP3.38□□□□□ -1.87
TRIM59-202ENST00000468542 TNFSF15O95150 251 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 ONECUT2O95948 504 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 RECKO95980 971 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 MT-ND3P03897 115 aa3.38□□□□□ -1.87
TRIM59-202ENST00000468542 S100BP04271 92 aaPredicted RBP3.38□□□□□ -1.87
TRIM59-202ENST00000468542 CYC1P08574 325 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms