RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 XKRXQ6PP77 449 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 SUSD1Q6UWL2 747 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 NEK10Q6ZWH5 1172 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 PEX26Q7Z412 305 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 PRUNE1Q86TP1 453 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 UBL4BQ8N7F7 174 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 PPHLN1Q8NEY8 458 aaKnown RBP12.4□□□□□ -0.42
PTPN7-207ENST00000468385 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 ATG4AQ8WYN0 398 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 FOPNLQ96NB1 174 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 OR2A5Q96R48 311 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 TUBB6Q9BUF5 446 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 MRPS30Q9NP92 439 aaKnown RBP12.4□□□□□ -0.42
PTPN7-207ENST00000468385 IGSF5Q9NSI5 407 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 TREX1Q9NSU2 369 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 STMN3Q9NZ72 180 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 TSR3Q9UJK0 312 aaKnown RBP12.4□□□□□ -0.42
PTPN7-207ENST00000468385 ITGB1BP2Q9UKP3 347 aa12.4□□□□□ -0.42
PTPN7-207ENST00000468385 DCHS2Q6V1P9 2916 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 C2CD3Q4AC94 2353 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 A0A0A6YYC8 382 aaPredicted RBP12.39□□□□□ -0.43
PTPN7-207ENST00000468385 E7EVH7 732 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 I3L1I5 382 aaPredicted RBP12.39□□□□□ -0.43
PTPN7-207ENST00000468385 SLC19A2O60779 497 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 MATN4O95460 622 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 IFNB1P01574 187 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 ANXA5P08758 320 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 ETS1P14921 441 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 AGAP20933 346 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 AP2B1P63010 937 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 SNRPNP63162 240 aaKnown RBP12.39□□□□□ -0.43
PTPN7-207ENST00000468385 MAT1AQ00266 395 aaKnown RBP12.39□□□□□ -0.43
PTPN7-207ENST00000468385 PCID2Q5JVF3 399 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 ZNF425Q6IV72 752 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 RAD9BQ6WBX8 426 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 LRRC6Q86X45 466 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 MPP5Q8N3R9 675 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 ACRBPQ8NEB7 543 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 OR9A1PQ8NGU1 263 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 SMPDL3AQ92484 453 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 BIRC8Q96P09 236 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 TSPY26PQ9H489 355 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 RAB6BQ9NRW1 208 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 TINAGQ9UJW2 476 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 MKL2Q9ULH7 1088 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 PKDREJQ9NTG1 2253 aa12.39□□□□□ -0.43
PTPN7-207ENST00000468385 NCOA6Q14686 2063 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-207ENST00000468385 IGHV3-20A0A0C4DH32 117 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 ARHGEF33A8MVX0 844 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 MIF4GDA9UHW6 222 aaKnown RBP12.38□□□□□ -0.43
PTPN7-207ENST00000468385 MYO1CO00159 1063 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 P2RX6O15547 441 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 LIASO43766 372 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 NIPSNAP2O75323 286 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 NDUFS3O75489 264 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 FTCDO95954 541 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 C8orf89P0DMQ9 161 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 MYBL2P10244 700 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 RPA3P35244 121 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-207ENST00000468385 CASP6P55212 293 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 EIF3BP55884 814 aaKnown RBP12.38□□□□□ -0.43
PTPN7-207ENST00000468385 KRTAP10-9P60411 292 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 PRDX1Q06830 199 aaKnown RBP12.38□□□□□ -0.43
PTPN7-207ENST00000468385 LONRF1Q17RB8 773 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 ZNF766Q5HY98 468 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 ICE2Q659A1 982 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 SHISA5Q8N114 240 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 ADAMTS18Q8TE60 1221 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 GPR137Q96N19 417 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 VN1R1Q9GZP7 353 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 DRC3Q9H069 523 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 TAC3Q9UHF0 121 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 TEKT2Q9UIF3 430 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 ZNF835Q9Y2P0 537 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 PCDHGB6Q9Y5F9 930 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 POLQO75417 2590 aa12.38□□□□□ -0.43
PTPN7-207ENST00000468385 A8MUI8 341 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 PSIP1O75475 530 aaKnown RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 SEC24DO94855 1032 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 IPO7O95373 1038 aaKnown RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 APRTP07741 180 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 ESRRAP11474 423 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 EZRP15311 586 aaKnown RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 ARNTP27540 789 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 NMBRP28336 390 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 ATP5DP30049 168 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 FMO4P31512 558 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 KIR3DL1P43629 444 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 SMSP52788 366 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 SESN2P58004 480 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 CRADDP78560 199 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 FAM53BQ14153 422 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 ARHGAP19Q14CB8 494 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 TESK1Q15569 626 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 H3F3CQ6NXT2 135 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 Q6ZPB1 254 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-207ENST00000468385 LANCL3Q6ZV70 420 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 BEST3Q8N1M1 668 aa12.37□□□□□ -0.43
PTPN7-207ENST00000468385 THAP3Q8WTV1 239 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms