RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ZNF470Q6ECI4 717 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 NDUFAF7Q7L592 441 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 ADCK2Q7Z695 626 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 REXO1L1PQ8IX06 675 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 SIRT6Q8N6T7 355 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 PRELID2Q8N945 189 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 OR1N1Q8NGS0 311 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 BRIX1Q8TDN6 353 aaKnown RBP20.03■□□□□ 0.8
COL9A3-207ENST00000467819 RERGQ96A58 199 aaPredicted RBP20.03■□□□□ 0.8
COL9A3-207ENST00000467819 ZNF669Q96BR6 464 aaPredicted RBP20.03■□□□□ 0.8
COL9A3-207ENST00000467819 MVB12AQ96EY5 273 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 MAGEB10Q96LZ2 347 aaPredicted RBP20.03■□□□□ 0.8
COL9A3-207ENST00000467819 C14orf105Q9NVL8 296 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 INTS10Q9NVR2 710 aaKnown RBP20.03■□□□□ 0.8
COL9A3-207ENST00000467819 PLA2G3Q9NZ20 509 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 SAMD15Q9P1V8 674 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 PCYOX1Q9UHG3 505 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 VPS9D1Q9Y2B5 631 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 SCN2AQ99250 2005 aa20.03■□□□□ 0.8
COL9A3-207ENST00000467819 CTAGE9A4FU28 777 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 ZNF839A8K0R7 811 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 SLC16A8O95907 504 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 HEXBP07686 556 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 ANXA5P08758 320 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 CLCN7P51798 805 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 PRDX1Q06830 199 aaKnown RBP20.02■□□□□ 0.8
COL9A3-207ENST00000467819 DHX34Q14147 1143 aaKnown RBP20.02■□□□□ 0.8
COL9A3-207ENST00000467819 SYT16Q17RD7 645 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 TTLL9Q3SXZ7 439 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 ZNF425Q6IV72 752 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 CAND1Q86VP6 1230 aaKnown RBP20.02■□□□□ 0.8
COL9A3-207ENST00000467819 AMER3Q8N944 861 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 GIMAP7Q8NHV1 300 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 ZNF480Q8WV37 535 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 OR2A5Q96R48 311 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 FBXO6Q9NRD1 293 aaPredicted RBP20.02■□□□□ 0.8
COL9A3-207ENST00000467819 HOMER3Q9NSC5 361 aa20.02■□□□□ 0.8
COL9A3-207ENST00000467819 UTP6Q9NYH9 597 aaKnown RBP20.02■□□□□ 0.8
COL9A3-207ENST00000467819 MYO7BQ6PIF6 2116 aa20.02■□□□□ 0.79
COL9A3-207ENST00000467819 LRBAP50851 2863 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 A0A0A6YYC8 382 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-207ENST00000467819 DYTNA2CJ06 578 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 I3L1I5 382 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-207ENST00000467819 SMAPO00193 183 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 HAT1O14929 419 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 P2RX6O15547 441 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 CELA2AP08217 269 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 CCDC175P0C221 793 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 EZRP15311 586 aaKnown RBP20.01■□□□□ 0.79
COL9A3-207ENST00000467819 SOX11P35716 441 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 HSD17B2P37059 387 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 PER3P56645 1201 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 CTBP1Q13363 440 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 THOC5Q13769 683 aaKnown RBP20.01■□□□□ 0.79
COL9A3-207ENST00000467819 THEMIS2Q5TEJ8 643 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 PLD3Q8IV08 490 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 DENND6AQ8IWF6 608 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 BCORP1Q8N888 145 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 PSMF1Q92530 271 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 DRC3Q9H069 523 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 CCDC68Q9H2F9 335 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 MKKSQ9NPJ1 570 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-207ENST00000467819 OLAHQ9NV23 265 aa20.01■□□□□ 0.79
COL9A3-207ENST00000467819 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20■□□□□ 0.79
COL9A3-207ENST00000467819 IGHV1-45A0A0A0MS14 117 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 E7ENX8 843 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 F10P00742 488 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 KRT14P02533 472 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 STATHP02808 62 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 SERPINA7P05543 415 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 SLC26A3P40879 764 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 TAP2Q03519 686 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 GARNL3Q5VVW2 1013 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 NEK10Q6ZWH5 1172 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 TRIM58Q8NG06 486 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 SLX1AQ9BQ83 275 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 RIC8BQ9NVN3 520 aa20■□□□□ 0.79
COL9A3-207ENST00000467819 FAM237BA0A1B0GVD1 139 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 GOLGA8MH3BSY2 632 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 FOXS1O43638 330 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 FDXRP22570 491 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 MAGEA6P43360 314 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 MAT1AQ00266 395 aaKnown RBP19.99■□□□□ 0.79
COL9A3-207ENST00000467819 RPUSD3Q6P087 351 aaKnown RBP19.99■□□□□ 0.79
COL9A3-207ENST00000467819 TTC27Q6P3X3 843 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 ZNF549Q6P9A3 640 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 ZC3H7AQ8IWR0 971 aaKnown RBP19.99■□□□□ 0.79
COL9A3-207ENST00000467819 ARHGEF39Q8N4T4 335 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 AMER2Q8N7J2 671 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 ASB11Q8WXH4 323 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 TGIF2Q9GZN2 237 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 MKL2Q9ULH7 1088 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 MED16Q9Y2X0 877 aa19.99■□□□□ 0.79
COL9A3-207ENST00000467819 TRAV17A0A0B4J275 112 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 A0A1W2PQ72 361 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 TXNDC9O14530 226 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 KIF5CO60282 957 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 ZG16O60844 167 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 JRKO75564 520 aa19.98■□□□□ 0.79
COL9A3-207ENST00000467819 WFS1O76024 890 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms